| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1486 |
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| Symbol | |
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| ID | 8132427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1734194 |
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| End bp | 1735102 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864776 |
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| Product | putative lipid kinase |
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| Protein accession | YP_003017066 |
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| Protein GI | 253687876 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCATT ATTCAGCAGT GAAGGAATCA GGCCCAACAG CGCTTTTATT TATTAATAAG
CATGCGCGGA ATGGCGATTC CTCTGCGCGC TATGTGAAGC AGCTATTACT GGAAAGCCGG
ATTCACATCG TCGAACCGGA TGAAAACGCG TCGGGCTCAT GCAGCGATAT CATCCGCGCG
TACGCGGATC TGGTGGATTT TGTCATTATC GGCGGTGGCG ATGGCACGCT AAATTCTGCC
GCGCCAGGCC TGGTGGATAC CGGATTGCCG CTGGGCGTGT TGCCTTTAGG GACGGCGAAT
GACTTTGCCC GTACGGTGGG CATTCCCAGA GAGATCCGGC AGGCGGTTCA AGTTATCGTC
GACGGGCAGC GGCGTGCCGT TGATTTGGGC GAGGTCAACG GGCATCTGTT TTTTAACGTT
TCCAGTATTG GGTTTTCTGC GGCATTGGCG CGCGGGCTGT CGGCGAAATC CAAGAAACGG
TGGGGAACAT TAGGCTATGC GCTGGCGGCT TTTAAGCTCT TGAAGCAAAG TCGTCCTTTC
CGCGTTGAGA TCGATCATGA CGGCATGAAA GAGCGGGTGA GAACCGTGCA GGTGTCGGTG
GGGAACGGAC GTTTCTATGG CGGCGGCATG GCGGTAGCAG ACAGCGCAGC GCCCGACGAT
GGGCGGCTGG ACGTGTACAG TCTGGAAGTG TCCCACTGGT GGGAAATGGT GGCACTGATT
CCCTTTATCC GCAGAGGAAC GCACGGTCGC TGGCGCAAGG TTCGCGCTTT TTCCGCCAAG
CAACTGACGT TGAGTACTCC GAAGCCGCAC GATATTAATG CGGATGGTGA ACTGATTGGT
AAAACACCCG CAGTGTTCGG GATCAGAGAG AAGGCGATTG AGGTTTTTGC GCCATCGGTG
CCTGAATAG
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| Protein sequence | MSHYSAVKES GPTALLFINK HARNGDSSAR YVKQLLLESR IHIVEPDENA SGSCSDIIRA
YADLVDFVII GGGDGTLNSA APGLVDTGLP LGVLPLGTAN DFARTVGIPR EIRQAVQVIV
DGQRRAVDLG EVNGHLFFNV SSIGFSAALA RGLSAKSKKR WGTLGYALAA FKLLKQSRPF
RVEIDHDGMK ERVRTVQVSV GNGRFYGGGM AVADSAAPDD GRLDVYSLEV SHWWEMVALI
PFIRRGTHGR WRKVRAFSAK QLTLSTPKPH DINADGELIG KTPAVFGIRE KAIEVFAPSV
PE
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