Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1480 |
Symbol | |
ID | 8132421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1727627 |
End bp | 1728013 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644864770 |
Product | hypothetical protein |
Protein accession | YP_003017060 |
Protein GI | 253687870 |
COG category | [S] Function unknown |
COG ID | [COG3755] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.947904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TCGCCATTGC CCTCTTTGCT CTACTGCCCT TAACGCAAGC CGAAGCAGCA GACTGCGGCA ACGCCAGCAC ACAGCTAGAA ATGAGCCAGT GTGCTGCTGA TGAGTATAAA AAAGTGGATG ACGAGCTTAA TCGACTTTAT CAGGATGTTG CCAAGCGTCT GGTGATTGAA GAGCACAAAC CATTACTCAA ATCAGCCCAA AGAAAATGGA TTGCCTATCG CGATGCTGAC TGTGAGTTTC AGACCTTCCC AACAACAGGG GGATCGATCC ATGGCATGCT GTATTCCCAG TGCCTGACGC AGAAAACTGC CGAGCGCGTA GAAGAATTCA AAAGCATGCT ACGTTGTAAA GAAGGGGATT TGAGCTGCCC GCTTTAA
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Protein sequence | MKKFAIALFA LLPLTQAEAA DCGNASTQLE MSQCAADEYK KVDDELNRLY QDVAKRLVIE EHKPLLKSAQ RKWIAYRDAD CEFQTFPTTG GSIHGMLYSQ CLTQKTAERV EEFKSMLRCK EGDLSCPL
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