Gene PC1_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1480 
Symbol 
ID8132421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1727627 
End bp1728013 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content48% 
IMG OID644864770 
Producthypothetical protein 
Protein accessionYP_003017060 
Protein GI253687870 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.947904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TCGCCATTGC CCTCTTTGCT CTACTGCCCT TAACGCAAGC CGAAGCAGCA 
GACTGCGGCA ACGCCAGCAC ACAGCTAGAA ATGAGCCAGT GTGCTGCTGA TGAGTATAAA
AAAGTGGATG ACGAGCTTAA TCGACTTTAT CAGGATGTTG CCAAGCGTCT GGTGATTGAA
GAGCACAAAC CATTACTCAA ATCAGCCCAA AGAAAATGGA TTGCCTATCG CGATGCTGAC
TGTGAGTTTC AGACCTTCCC AACAACAGGG GGATCGATCC ATGGCATGCT GTATTCCCAG
TGCCTGACGC AGAAAACTGC CGAGCGCGTA GAAGAATTCA AAAGCATGCT ACGTTGTAAA
GAAGGGGATT TGAGCTGCCC GCTTTAA
 
Protein sequence
MKKFAIALFA LLPLTQAEAA DCGNASTQLE MSQCAADEYK KVDDELNRLY QDVAKRLVIE 
EHKPLLKSAQ RKWIAYRDAD CEFQTFPTTG GSIHGMLYSQ CLTQKTAERV EEFKSMLRCK
EGDLSCPL