| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1470 |
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| Symbol | |
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| ID | 8132409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1719667 |
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| End bp | 1720542 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644864760 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003017052 |
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| Protein GI | 253687862 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.91996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAC GCCGCTTCGT TACATTCAAA ACCGTGGTAG AAGAAGGTGC TTTCTCCAAA
GCAGCCCAGA AGCTCTGCTG CACACAATCC ACGATTACTT TTCATATCCA GCAGCTAGAG
CATGAGCTAT CAGTGCAGCT TTTTGAGAAG CTCGGTCGTC GGATGATTTT GACGCCTGCG
GGGAAGAAAC TCCTTCCTCA GGTATATGAA CTCACACGGG TATTAGAAAA TATTCGCCAA
ATGGCGCAGC ATGAAACTGA TCTTTCTGGC GATCTTCGGG TAGCGGTAGG AGAAACGCTG
TTAGCATATA AAATGCCGGA AGTGCTTCAA CGGTTTAGAG TAAAAGCACC CAAGGTACGC
TTATTCTTGC AATCAATGAA TTGCTATGCA ATTCGTGATG CCCTTTTATC AGATGAGGCT
GACTTAGGCA TTTTTTATCG TGTGGGTAAT GACGATGCAT TACATATGGA GAATTTCGGC
GATCAACCCC TTGTATTAGT CGCATCTCCT TTATTTGATA CCTATGACTT CACTCGCTCC
GGTCAACATA TTCCTACCAG TTTCATCATA AATGAACCCG AGTGTATATT TCGTCAAATA
TTTGAGAGTA ATTTAAGAGA GAGACGTATA ACTCTTGAAA ATACGGTTGA ACTCTGGAGC
ATAGAAAGTA TAAAAAAATG TGCAGCCAGC AATCTTGGAA TAACATTTCT ACCCAGATTC
GCGGTTGAGC ATGAACTGCA ATCTGGAGTG TTAAAAGAAT TACCTTTTTC AGATTCTCCA
ATAACAATTA ATGCCCTTTG TGCCTACCAT ATTGACAGGA CAGTGAGCCC TGCCATGAAA
GTATTCCTTG AGTGTATGCA AGAATGCTTA GCGTGA
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| Protein sequence | MDLRRFVTFK TVVEEGAFSK AAQKLCCTQS TITFHIQQLE HELSVQLFEK LGRRMILTPA
GKKLLPQVYE LTRVLENIRQ MAQHETDLSG DLRVAVGETL LAYKMPEVLQ RFRVKAPKVR
LFLQSMNCYA IRDALLSDEA DLGIFYRVGN DDALHMENFG DQPLVLVASP LFDTYDFTRS
GQHIPTSFII NEPECIFRQI FESNLRERRI TLENTVELWS IESIKKCAAS NLGITFLPRF
AVEHELQSGV LKELPFSDSP ITINALCAYH IDRTVSPAMK VFLECMQECL A
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