| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1455 |
|---|
| Symbol | |
|---|
| ID | 8132394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 1706176 |
|---|
| End bp | 1706616 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644864745 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003017037 |
|---|
| Protein GI | 253687847 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.250685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCAA GTCACGCAGA AATGACTAAT GACACATCCA TCAATGACGC GGTTAACCCA
GAAACGTCGT CAGCGGAAAG CCTCGACGAT GCTGCATTTG ACCATCCTTG TCCGATCCGT
GATGTATTGG ATCGCATTGG TGACCGGTGG AGCCTGTTAA TACTGGAGGC ACTTGCGCAA
AAGACGCTGC GTTTTAACGA ATTACATCGC CATATTGACG ATATTTCGCG CCAGATGCTG
TCACGCACGT TAAAACGGCT AGAGGCGGAT GGATTTATTC ATCGGACGAT TTATGCGGAA
GTTCCCCCAC GTGTGGAATA CACGCTGACG CCATTAGGTC ACTCCTTTTT GCAGCCCATG
CAACTGTTAA TTCAGTGGGC CGATAAAAAC CATGCCGAGA TTTGCCGCTC CCGCCGTCAG
GCCAGACAAC GCGATGCCTG A
|
|---|
| Protein sequence | MQPSHAEMTN DTSINDAVNP ETSSAESLDD AAFDHPCPIR DVLDRIGDRW SLLILEALAQ
KTLRFNELHR HIDDISRQML SRTLKRLEAD GFIHRTIYAE VPPRVEYTLT PLGHSFLQPM
QLLIQWADKN HAEICRSRRQ ARQRDA
|
|---|
| |