| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1451 |
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| Symbol | |
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| ID | 8132390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1701774 |
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| End bp | 1703060 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864741 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003017033 |
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| Protein GI | 253687843 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGACC AGTCGAAAAT ACAAGGCAAT GTGATGGCGC GCAAAAAAAC TATTGGAAAC
GATCAGATTC TGGACGCTGC GGAACAGGTG CTGCTGCGCG ATGGCGTGCA TCGTTTTACG
CTAGATGCCG TTGCCGCCGA AGCTGGCATA AGTAAAGGCG GACTGGTTTA CAGCTTCCCC
AGCAAAGACC TGTTGATCAT GACGATGCTA TCGCGTGAGC TGGCACGTTT TGAACAGGAA
GCGCAGCAGC AAACCGCGCG TTACGCCAAT CAGCCTTACG CCGATGTATT GGGCCACATA
GCGGCGATAG GTCAGGAAGA GGACGAGACA ACATCGCGCG CGGTGGGTCT GCTTACCGCA
CTGGTTCACT CCCCCGCGAT GCTGGAACCC GTGCGGGAAT TTTACCGCAT CCGACTGGAT
CGACTACGTG ACGCCACGCC GACCATGCAG CGTATCCGCC TGGCGTTTCT TGCCACAGAA
GGCGTTTTTC TGTTGCAGGG ACTGGGCTTC GTGACGCTGG ATCGCGAGGA ACGGCAGACG
ATGATTGATG ATGCCAAATC GTTGTTCCAG TCGGGCGATA ACGCCGATAC GCTGACGGCA
TATACCACTG CGGATCACCG CGTCACATCG TCAGCGACCC CCACCGCTTA TTCGCAAGAA
ACGCCTTCTA TTCCCGCAGG AGAAACGATC TCCGAACAGG CGATCGCCTG GCTGGCAGAG
AAAGGCGTCG CACCGAGTGG TACAGGATTA GGAGCTGTAC ATTCCCGTGC CGCACATATT
GTCGAGACGG CCACGAACAT CATCAAACGT GACGGCATCA GTGCCTTAAC GCATCGTGCT
GTTGCGAATG AAGCCCACAT ACCGTTAGGG TCAACCACCT ACCATTTTAA CAGTCTGGAC
GACATGCTGA ATGCGGTAAT GCGCAGTGCG ATTGCCTTAT TTCGCGATGA CATGTTTAGC
TGGTTTCATC AGCGTCGCCA CGACGACCCG CGTGATGTTC TGACCGATTT TGTCATACGC
GGCATTGAAG ATATTGACGA TCTGGCGCGT GAGTATGAAC TCTTCACCGC CGCCATTTCA
CGCCCTTCCC TGCGCCCTAT CGCGCTCGAA TGGTCTAACA CCGTTGTCGC CATCATCAAA
GTGGTCACTC CCGACAGCGC CGCGCTGCCG CTGGGTACGC TAATGAACGG CTTTTTCATC
CGCGCGCTGC TGGAAAAACA CGAGCGCACG CTACCGCGCG ATCTGGTTTA TCAGTCAGTT
TCTGCGCTCT ATAACGCCTT TCGCTAA
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| Protein sequence | MTDQSKIQGN VMARKKTIGN DQILDAAEQV LLRDGVHRFT LDAVAAEAGI SKGGLVYSFP
SKDLLIMTML SRELARFEQE AQQQTARYAN QPYADVLGHI AAIGQEEDET TSRAVGLLTA
LVHSPAMLEP VREFYRIRLD RLRDATPTMQ RIRLAFLATE GVFLLQGLGF VTLDREERQT
MIDDAKSLFQ SGDNADTLTA YTTADHRVTS SATPTAYSQE TPSIPAGETI SEQAIAWLAE
KGVAPSGTGL GAVHSRAAHI VETATNIIKR DGISALTHRA VANEAHIPLG STTYHFNSLD
DMLNAVMRSA IALFRDDMFS WFHQRRHDDP RDVLTDFVIR GIEDIDDLAR EYELFTAAIS
RPSLRPIALE WSNTVVAIIK VVTPDSAALP LGTLMNGFFI RALLEKHERT LPRDLVYQSV
SALYNAFR
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