Gene PC1_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1448 
Symbol 
ID8132387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1697098 
End bp1697760 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content54% 
IMG OID644864738 
Productputative lipoprotein 
Protein accessionYP_003017030 
Protein GI253687840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.288417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCACAT TATCCCGGGT TGCACGTCCT ACCGTATTGG TTCTGGCTGT CGTACTCGCA 
GGCTGCGCGA GCAATCCCCC CGTCCGCTAC AGCGGTATCG CATCATCTAC GCAATTGGCG 
CAAAACACCG GAAAGCACGC AGACCGCATT CCTTACCGTT ACACCACGGC CGTCGACTGG 
AAGCAATACA CCCACATCAT CATCGATCCG GTCAGCATTT ATCAGGGAAG CGACAGCCAA 
TTTAACGACA TGTCACAACA GGATAAGCAG TCGCTGGCCG CCTATATGCA GGATGCGTTC 
AGTAAAACCT TGCGATCCCG TTTCAGCGAA GTGACGTCGC CTGCGCCCGG TACACTGCGG 
CTCAAACTGA CGCTAACGGG GGCCGATACG ACGACGCCGG TTGCCGGTAC ATTTACCAAA 
TTTGACCTGG CTGGCGGGCC GTACAACATT GTGCAATCCA TTCGCGGTAA AGAGGGGCTG 
CTTAACGGCT CGGTAAGCTA TGCCGTTGAA ATTTATGATG CGACAACCAA CAAATTGCTC 
AATGCCTACG TCGCGAAACA GTACCCGAAC GCCATGAACG TCAGTGCCAG CATAGGGGCA 
TTGAGCGCCG CGGAGGTGGG TATCGATAAA GCGGCTGAAG AACTGGCTGA CATGCTGAAG 
TAA
 
Protein sequence
MFTLSRVARP TVLVLAVVLA GCASNPPVRY SGIASSTQLA QNTGKHADRI PYRYTTAVDW 
KQYTHIIIDP VSIYQGSDSQ FNDMSQQDKQ SLAAYMQDAF SKTLRSRFSE VTSPAPGTLR 
LKLTLTGADT TTPVAGTFTK FDLAGGPYNI VQSIRGKEGL LNGSVSYAVE IYDATTNKLL 
NAYVAKQYPN AMNVSASIGA LSAAEVGIDK AAEELADMLK