| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1437 |
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| Symbol | |
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| ID | 8132376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1685047 |
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| End bp | 1686294 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864727 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003017019 |
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| Protein GI | 253687829 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAA GCCCGATAAC ACGCTATCTG CCCTATTGGT GTTTCTATCT TCATCAGGGC
ATGATCACCG CACTCATTAT GCAAGGCGTG GCGGGCTATT TTCGCCACGC GGGGTTGGAT
CTTGCGCAGT TAAGCTGGCT GTCGCTGACC TTTCTCCCGT GGATTGCCAA ATGCCTCTGG
GCACCGTGGG GCGAGCGCCA CGCACTTCCT CTGCGTGGTA ATCCCTATTT AGGCAGTCTG
GTACTACTCC AGATCGCGAT GGCGATAATG CTGGTCGGGA TTGGCATGAT TTCACCGGAT
CAGTCTGTTC TGGCTATTGT CATCGCGCTG ATGCTGTTAG CGCTGCTCTC CGCCAGCCAC
GATATCTATG CCGACGGCAT CACGATTTGT ACCACCAGCG CTGCCAGTCG CGCGCTGGCG
AATACCGCAC AGGTCGGCGG CAGCTATCTG GGGATTCTGT TCGGCTCTTA TGCATTCCTG
AGTATTGCAG AACAGGCGGG ATGGCGAGGT GGCTTCTTCG CACTGGCGGG TCTATCGCTG
CTGATGCTCA TCCTGCCGCT GCGCTATACC CGGCAACCTC AAATTCAGCA TCATCAGATT
CAGCAAGCCA TACGCCCAAC GCTCAACCGT CTGACATTTA AAGTGCTCTG GCCGGTATTA
GCCTTCACGG CCATTTTCTA TCTGGCAATG CGCGGCATGA TGGCGCTACA GACCGTCATG
CTGATCGACC AAAAGCTTAG CCTGAGCCAA TTGGGCATGA TCATGACCGT GTACAGCACC
GTCGTCAGCG GCGTAGGGAT TGTGCTCGCC AACGTCCTGA TTCGTCGCAT GGGCGCACTG
CGCTGTCTGC TGCCCGTGAT GGTCACGCAC GCGCTACTCG CCGTCGCGCT GGCCGTCGGC
TATCCGCTGT TTACGCTGAA TCTCTGGATC GCGCTCTTTG GCGTGGTCAA TCTGGCCGCC
GCAATTGGGT TTGTCACGTT ATACAACGTC CTGATGGGGC TGGTCAGACC CCATCAACCT
GCGTCCGACT ATGCGCTGTT TCAGTCCACC GATGCCGCCG TCGCCATGAT CGTATCGATC
GCCGCACTCC AGTTAGCACA TTACACAAAC TATCAGACCA CGCTGGGCGT ACTGGCCTGT
TTCGCCATCG CCAGCCTGTG GCCTGCCAAA CGGCTATCTC TACGGCTTTC TCGCGTGTTT
TCTGACGGCG TTACACCCGC TACCGTCAGG CAGCAAGGAC AGGATTGA
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| Protein sequence | MTESPITRYL PYWCFYLHQG MITALIMQGV AGYFRHAGLD LAQLSWLSLT FLPWIAKCLW
APWGERHALP LRGNPYLGSL VLLQIAMAIM LVGIGMISPD QSVLAIVIAL MLLALLSASH
DIYADGITIC TTSAASRALA NTAQVGGSYL GILFGSYAFL SIAEQAGWRG GFFALAGLSL
LMLILPLRYT RQPQIQHHQI QQAIRPTLNR LTFKVLWPVL AFTAIFYLAM RGMMALQTVM
LIDQKLSLSQ LGMIMTVYST VVSGVGIVLA NVLIRRMGAL RCLLPVMVTH ALLAVALAVG
YPLFTLNLWI ALFGVVNLAA AIGFVTLYNV LMGLVRPHQP ASDYALFQST DAAVAMIVSI
AALQLAHYTN YQTTLGVLAC FAIASLWPAK RLSLRLSRVF SDGVTPATVR QQGQD
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