| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1427 |
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| Symbol | |
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| ID | 8132366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1672209 |
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| End bp | 1673045 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644864717 |
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| Product | ABC transporter related |
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| Protein accession | YP_003017009 |
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| Protein GI | 253687819 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0305072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACC ACCTGCATGC GGTTCCCACA CCGTTTTTAA GCCTCGAACA CGTCAGCCGC
TATCGCCAAA CGTCGCGTTT GCCGTGGCAA AAGATCGATC CTGCCGGTGC GATTTTTCAC
GACCTGTCGC TGACGATGCA ACAGCATGAA CGCGTCGGGC TGGTTGGCGC TTCCGGCTGT
GGTAAATCCA CGCTGCTAAA AACCCTACTC GCACTTGAAG CGCCGGAGCG TGGCGCCGTG
TACTGCGACG GAAACCTGAT TAAGCCGGGA TCGGTGCGTT CGCTGATTTG GTATCGCCGC
CGCGTCCAGT ATATTCCTCA GGATCCGGCA GGTTCGCTCG CGCCACGCCA GCGCGTCGCC
GATCTTCTCA CCGAGCCGCT GAAACGGCTC CGTCCTGATG AAAACCGACA TGTTAATGGA
AAGAATTCGA CCCGTCTGCG TGAAGTCATG GATCAGGTGG GGTTGAGCAC CACGCTTCTG
GACAGGCTTG CCGTGCAGCT TTCCGGCGGT CAGGCACAAC GTGTCGCGCT GGCGCGAGCG
CTGATGGTTC AACCCGAGTT TTTAGTGGCG GATGAGCCTG TCAGCGGTCT GGATTTGCCG
TTGCGCGAAC AGATTAAAAC GCTGCTTCAA CAGGTCACCA AACAAAACAA GATGGGTTTA
CTGATGGTAT CGCACGATAT TTCCATGCTC GCCGGTCTGT GCGACAGAAT GCTGGTTATG
GACGGCGGAT GCATCATTGA AGATCGCCCC ACCGCCGAGG TACTGGCTTC ACCGCAGCAG
GCGCATACTG CCCGCCTGTT GCAGGCCGTA CCCGCGCTGT CGACGTCTGG CTATTAG
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| Protein sequence | MNHHLHAVPT PFLSLEHVSR YRQTSRLPWQ KIDPAGAIFH DLSLTMQQHE RVGLVGASGC
GKSTLLKTLL ALEAPERGAV YCDGNLIKPG SVRSLIWYRR RVQYIPQDPA GSLAPRQRVA
DLLTEPLKRL RPDENRHVNG KNSTRLREVM DQVGLSTTLL DRLAVQLSGG QAQRVALARA
LMVQPEFLVA DEPVSGLDLP LREQIKTLLQ QVTKQNKMGL LMVSHDISML AGLCDRMLVM
DGGCIIEDRP TAEVLASPQQ AHTARLLQAV PALSTSGY
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