| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1348 |
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| Symbol | |
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| ID | 8132286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1571800 |
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| End bp | 1573263 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864638 |
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| Product | glycoside hydrolase family 1 |
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| Protein accession | YP_003016931 |
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| Protein GI | 253687741 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.843045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA ATATCGCATT CCCGGAACAC TTTTTATGGG GCGGCGCGAT TGCCGCCAAT
CAGGCCGAAG GCGCATGGAA TGAAGACGGC AAGGGGCCGT CGGTCGCGGA CGCCATTACC
TGGAAACCGA ATCTCGATCT GAAAAATTAC CATGCCCACA TGGCGCTAAC GGACGACAAC
GTTGCCGATG CGTTCAACGG CAAAAATGAT GCTTTCTATC CCAAACGGCG CGGCATCGAT
TTCTACCACC GCTACCAAGG CGATCTGGCG CTGTTTGCCG AAATGGGCTT TAAAGTGCTG
CGCGTTTCCA TTGCCTGGTC GCGCATCTTT CCAACCGGAG AAGACAGCGA ACCGAATGAA
GCCGGCTTGC AGTTTTACGA CGCTCTGTTC CGCGAGATGC GCAAACACGG CATCGAGCCG
CTGGTGACGC TTTCACATTA TGAAATGCCG CTGGCGCTGA GTGAGAAATA CAATGGTTGG
GTGCACCGTA ACGTGCTGGA TGCCTTCGTG CGCTTCAGCA ATGTCTGCTT CGATCGTTAT
AAAGATCTCG TTCGCTACTG GCTGACCTTT AACGAGATCG ACAGTATCCA TCGTCACCCG
TTTACCACAG CGGGTATTCG TGAAGAGAAA AGCGCTCCGG GGCAGGCCAA ACAGGATATT
TATCAGGGGC TGCACCACCA GTTTGTGGCC TCGGCCATCG TCACCCGCGA CTGCCATAAA
AAAATCCCCG GCAGCCAGGT GGGTTGTATG TTGACCAAAC TGACGACCTA TCCTCACTCC
TGCCGTCCAG AAGACGTCGA AGCTGCGCTG AAAAAGAACC TCGAAAACTA TTTCTATGCC
GATGTGCAGG TGTTCGGTGA ATATCCGCCG CTCATCAAGC GCGACCTTGA ACGACGCGGT
ATCCATATCA CCATGCAGCC CGACGATCTG GCTATTCTCA AGCAGCACAC CGTGGATTTT
GTGTCGTTCA GCTATTACAT GTCGCTCACC GAATCTACGC AGCCGGACGC CGAAAGAATC
CCAGGAAATA CCGTTCTGGG CGTGAAAAAC CCGTATCTGC CAGCCTCAGA CTGGGGATGG
CAGATCGACC CTATCGGGCT AAAAATCTCC CTGCTGGAAC TTTACGATCG CTACCAGAAG
CCGCTGTTTA TTGTCGAAAA TGGCCTGGGC GCAAAAGACG TTGTCGAGAA CGGTAAAATC
CACGATCCTT ACCGCGTTGA CTACTTCCGT TCACATTTCG AGCAAATGCG TGAAGCGATT
GGTGAAGGCG TTGAACTGCT GGGGTTCACC AGTTGGGGAG CGATTGACAT CATCAGCGCG
GGCACCTCAC AGATGTCGAA ACGCTATGGG TTTATCTATG TCGATCAGGA TGACGAAGGC
AACGGCTCAC TGGCGCGTCT GAGAAAGGAT TCGTTCTACT GGTATCAGAA GGTGATTGCG
ACAAATGGCG CCGACCTCAC CTAA
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| Protein sequence | MDKNIAFPEH FLWGGAIAAN QAEGAWNEDG KGPSVADAIT WKPNLDLKNY HAHMALTDDN
VADAFNGKND AFYPKRRGID FYHRYQGDLA LFAEMGFKVL RVSIAWSRIF PTGEDSEPNE
AGLQFYDALF REMRKHGIEP LVTLSHYEMP LALSEKYNGW VHRNVLDAFV RFSNVCFDRY
KDLVRYWLTF NEIDSIHRHP FTTAGIREEK SAPGQAKQDI YQGLHHQFVA SAIVTRDCHK
KIPGSQVGCM LTKLTTYPHS CRPEDVEAAL KKNLENYFYA DVQVFGEYPP LIKRDLERRG
IHITMQPDDL AILKQHTVDF VSFSYYMSLT ESTQPDAERI PGNTVLGVKN PYLPASDWGW
QIDPIGLKIS LLELYDRYQK PLFIVENGLG AKDVVENGKI HDPYRVDYFR SHFEQMREAI
GEGVELLGFT SWGAIDIISA GTSQMSKRYG FIYVDQDDEG NGSLARLRKD SFYWYQKVIA
TNGADLT
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