| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1344 |
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| Symbol | |
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| ID | 8132282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1567222 |
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| End bp | 1567905 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644864634 |
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| Product | ABC transporter related |
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| Protein accession | YP_003016927 |
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| Protein GI | 253687737 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.274567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTCTGAGG CTACACTCGT TCTGAACAAT GTCCACGTCG CCTACGGGCA CAAGCATAAT
TTTCATCACG TGCTAAACGG TTTTTCCATG CAGGTTGCCG CCGGTGAACT GGCCTGCCTG
CTGGGGGCAT CAGGGTGCGG TAAAACTACC GCTTTACGCG CGATCGCAGG TTTTGAGCAT
CTGACTCAGG GAACGATTCA CGTCGGCGGA CGCTGTGTGG CCGGCCCAGA CGTGCATCTG
CCACCGGAAC AGCGCAACGT CGGGATGGTG TTTCAGGACT ATGCGCTGTT TCCCCATCTG
ACCGCCGCGC AGAATATTGC CTTTGGCCTG AGAAAACAGC CGAAAGATCT ACAACACTCA
CGCGTCCGCG CCATGCTTGA ACTGGTCGAT CTTGCCTCTC TGTCGCAGCG CTACCCGCAT
GAGATGTCCG GCGGACAACA GCAGCGAATC GCGCTCGCAC GAGCATTGGC CCCGCAGCCT
GCTGTGCTGC TGCTCGATGA GCCGCTATCC AGCCTCGACC CCGACAGCCG CAAACGGCTG
GGGCAGGAAG TGCGTGACAT CCTACGCGAT GCCGGACAAA CCGCGCTTCT CGTCACACAC
AGCGAACAGG AAGCCGAGCT GATGGCCAGC CATATTGGCT ATTTGAAAGA AGGAGCGTTG
CAATGGCGGG AACGAAGCTG CTGA
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| Protein sequence | MSEATLVLNN VHVAYGHKHN FHHVLNGFSM QVAAGELACL LGASGCGKTT ALRAIAGFEH
LTQGTIHVGG RCVAGPDVHL PPEQRNVGMV FQDYALFPHL TAAQNIAFGL RKQPKDLQHS
RVRAMLELVD LASLSQRYPH EMSGGQQQRI ALARALAPQP AVLLLDEPLS SLDPDSRKRL
GQEVRDILRD AGQTALLVTH SEQEAELMAS HIGYLKEGAL QWRERSC
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