| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1335 |
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| Symbol | |
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| ID | 8132273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1554823 |
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| End bp | 1556754 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644864625 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_003016918 |
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| Protein GI | 253687728 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3962] Acetolactate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACGT GTCGCATCAC CATGGCGCAA GCGCTGGTCC GTTTTCTCAA CCAGCAATAC
ATCAGCGTAG ACGGTGAAGA ATCCCCTTTT GTGCAGGGCG TCATGACCAT TTTTGGTCAC
GGTAATGTGC TGGGCATCGG TCAGGCGCTG GAGCAGGAGG CGAACCGTCT CACTGTGCAT
CAGGGGTGCA ACGAACAGGG AATGGCGCAC ATCGCCGTTG GGTTCGCCAA ACAGCATAAG
CGGCGGAAAA TTTATGCGGT GACCTCGTCG GTGGGGCCGG GGGCGGCAAA TATGGTGACC
GCCGCGGCGA CCGCGACCGC CAACCGTATT CCGGTGCTGC TGTTGCCCGG CGATCTCTTC
GCCTGCCGTC AGCCGGATCC GGTGTTGCAG CAGGTCGAGC AATATCACGA TCTGTCGATC
AGCACCAATG ACTGCTTTAA ACCGGTTTCT CGCTACTGGG ATCGCATTAA TCGCCCTGAG
CAACTGATGA GTGCGCTGAT TAACGCCATG CGCGTGCTGA CCGACCCGGC CGATACCGGC
GCGGTAACGC TGTGTTTACC GCAGGATGTG CAGGCGGAAG TCTGGGATTA TCCGGCATCG
TTCTTCCGCA AGCGCGTCCA TCATCTCGAA CGTCGCCCGC CAGATGCGGC ACGGCTGGAG
GAAGCGGCAG CGCTGATTGC CAGAAAGCGC CGCCCGATGC TGATTTGCGG CGGTGGCGTT
CGTTATTCCG GCGCACATGA TGCGCTGGCG CAGTTTGCTG AGCAGTTTGC GATTCCGTTT
GGCGAAACGC AGGCGGGCAA AGGTGCGATT GTTTCCTCAC ATCCGCTGAA CTGCGGTGGT
ATCGGTGTGA CAGGCGGGCT GGCGGCGAAT CTGCTGGCGC AAGAAGCGGA TCTGGTGATT
GGCGTCGGGA CGCGTTTAAC CGATTTTACC ACCGGTTCCA AGTCGCTGTT TCAGAACCCG
AACGTCGAAT TTTTACTGCT TAACGTTGCC GAATTTGATG CGCTAAAACT GGATGCGCTG
CCCCTGATCG CCGACGCGCG CGTCGGGCTG CAAGCGCTGG CCGAACGGCT GGCGACGGCG
TCGTATCGTA GCGGCTGGCA GCAGGCTGTC GAACAGGCGC GTGCGGAATG GGAACGCGAG
CTACAGCGGC TGTTTACCGT GCAGGATAAA GGTGAACTGG TGCCTGAAGT GGTGGATGGT
CTGGAAGACA AGCTGGATGA ATATCGCCAG ACGTTGAATA CCCACCTGAC GCAAACGCGC
GTACTGGGGA TCCTGAATGA TGAACTGGAG GATAACGCGG TTGTCGTTGG CGCGGCAGGG
TCGTTGCCGG GCGATCTACA GCGCGTGTGG CAGGTGAAAA CGCCGGACAG CTACCATCTG
GAATATGGTT ACTCCTGCAT GGGGTACGAG ATTGCAGCGG CAATTGGCGC GCGGCTTGCG
ATGCCGCAAC AACCTGTCTA CGCGATGGTC GGTGACGGCT CCTACTTGAT GCTCCACACC
GAACTGCAAA CGGCGGTGCA AGAGGGCATT AAAATCACCG TGCTGCTGTT CGACAACGCA
GGCTTCGGCT GCATCAACAA CCTGCAAATG AGTCAGGGAA TGGGGAGCTT CTGTACGGAA
AACCGCTACC GGGATGAGGA ATCGGGGCAA CTGCGCGGTG CACTTATTCC GGTCGATTTC
GCCAAGAACG CGGAAAGCTA CGGCTGTAAA GCCTGGCGAG TGCATGATGA AGCCTCGCTC
AGACAGGCGC TGGTGGAATC ACGCCAGCAT ACGGGACCGG TGCTGCTTGA TATCAAGGTG
CTGCCGAAGA CCATGACGCA CGGCTATGAA TCCTGGTGGC GCACCGGCAC GGCGCAGGTT
GCGGATAATC CAGAGATTGA GACGGCGGCC AATAACGTGA AAACTGCGCT CTCCCGCGCA
CGGCAATATT AG
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| Protein sequence | MDTCRITMAQ ALVRFLNQQY ISVDGEESPF VQGVMTIFGH GNVLGIGQAL EQEANRLTVH
QGCNEQGMAH IAVGFAKQHK RRKIYAVTSS VGPGAANMVT AAATATANRI PVLLLPGDLF
ACRQPDPVLQ QVEQYHDLSI STNDCFKPVS RYWDRINRPE QLMSALINAM RVLTDPADTG
AVTLCLPQDV QAEVWDYPAS FFRKRVHHLE RRPPDAARLE EAAALIARKR RPMLICGGGV
RYSGAHDALA QFAEQFAIPF GETQAGKGAI VSSHPLNCGG IGVTGGLAAN LLAQEADLVI
GVGTRLTDFT TGSKSLFQNP NVEFLLLNVA EFDALKLDAL PLIADARVGL QALAERLATA
SYRSGWQQAV EQARAEWERE LQRLFTVQDK GELVPEVVDG LEDKLDEYRQ TLNTHLTQTR
VLGILNDELE DNAVVVGAAG SLPGDLQRVW QVKTPDSYHL EYGYSCMGYE IAAAIGARLA
MPQQPVYAMV GDGSYLMLHT ELQTAVQEGI KITVLLFDNA GFGCINNLQM SQGMGSFCTE
NRYRDEESGQ LRGALIPVDF AKNAESYGCK AWRVHDEASL RQALVESRQH TGPVLLDIKV
LPKTMTHGYE SWWRTGTAQV ADNPEIETAA NNVKTALSRA RQY
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