| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1333 |
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| Symbol | |
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| ID | 8132271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1551697 |
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| End bp | 1552554 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644864623 |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_003016916 |
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| Protein GI | 253687726 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATGG CAACCAGCCT GAGAGAATTA CAGGAACAGA TCCGCGAGCG CTATGATTCG
CTCAGCAAGC GGTTACAGCA GGTGGCGCAT TATGTGCTGG ATAATACCAA TAGCATCGCT
TTCGATACCG TCGCGGTGAT CGCCGAACGC GCTGACGTTC CCCCTTCAAC CCTGATTCGC
TTCGCCAACG CCTTTGATTT CAGCGGCTTC AACGAAATGA AACAGCTGTT CCGTATGAAC
CTGGTGGAAG AAACGGCCAG CTATACCGAC CGGGCGCGGC TGTTTCGGGC GATGGAAGCT
GACGCCGTGC CAGAAACGCC GCTGGATATT CTGCATGAGT TTGCCCGCTC AAACGCGCAG
GCGATGCAGC AGCTCGCGGC ACGCACTCCG CAAGAGGATC TGCAAAAAGC CGTCGATCTG
CTGGCACAGG CGGATACCAT CTATATCGTC GGGCTGCGGC GCTCGTTCAG CGTCGCCACT
TACCTCACCT ATGCGCTTAG CCATCTGGAA AGCAGCCCTA TTCTGGTCAA CGGTCTGGGC
GGCATGTTTC GTGAACAGCT CAGCCGTGTC AGTGCACGCG ATGTGGTGGT TTCCATCAGC
TTCTCGCCCT ATTCACAGGA AACCGTGATG GTCAGTGAGA TGGCCGCGAA GGCCGGAGCG
CGGCAAATCG TCATTACCGA CAGCCAGATC AGCCCGCTGG CGACGCTCAG CGATGTCTGC
TTTGTGGTGA AGGAAGCGCA GGTTGATGCG TTCCGTTCAC AGTCCGCCAC GCTGTGTCTG
GTGCAATCGC TGATGGTATC GCTGGCATAC CGACAGGGAA ACGGCGCAGA ACAGAGCGAA
AAACAGCAGC GCGGCTAG
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| Protein sequence | MPMATSLREL QEQIRERYDS LSKRLQQVAH YVLDNTNSIA FDTVAVIAER ADVPPSTLIR
FANAFDFSGF NEMKQLFRMN LVEETASYTD RARLFRAMEA DAVPETPLDI LHEFARSNAQ
AMQQLAARTP QEDLQKAVDL LAQADTIYIV GLRRSFSVAT YLTYALSHLE SSPILVNGLG
GMFREQLSRV SARDVVVSIS FSPYSQETVM VSEMAAKAGA RQIVITDSQI SPLATLSDVC
FVVKEAQVDA FRSQSATLCL VQSLMVSLAY RQGNGAEQSE KQQRG
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