Gene PC1_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1323 
Symbol 
ID8132261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1539758 
End bp1540540 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content52% 
IMG OID644864613 
Producthypothetical protein 
Protein accessionYP_003016906 
Protein GI253687716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00489097 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGCAC TCAATCGTAT CGCTACCTTG TTGCTGCTGG TTTCCGGCGT TGCGACGTCT 
GCGCAACTGA CGGTGAAATC ACCTCAACAG ACGATCGCCG TCGTTAAATT GGATGACGGT 
ACGCGTCTTG AAAAATTTTA TGAGCAGGTT CCCTGGCCAC AGAATATTAA CTGGCAAACC 
GCATTTATTT CTGATTTTGC GACGACGCAG AAGGTACGTG CGCAAGGGGA TGTCTTGCTG 
CAAAAGCTGG CTGAACTGGA AACACGTTGG CGCAATTCAG GCGATGGCGA TCTGGCGATC 
TCTGCCTGGC TGCTGAGAAA GACCATTAAT CCGATTAATG TTGCTGGTCG TATCAGTACC 
GATCTGGATC CTGACCGCGT GCGCGTATAT GCAGAAAATA ATCGCCCTCT GGTAGGGGAA 
TATGCACTGT ATGTGGCACC TCATGATGAC AAGCTGTCGC TGATTGGTCT GGTCAATACC 
TCTGCTGATG TGGGTGAATT GGAGACATCG GGCAAAGTGG CGCTGCGTGC CGGATGGTCA 
GTCGAAAATT ACCTCTCTGG ACGGCGGCTG ATTGCAGGAG CGGATAACAG TTACGGCTAT 
CTGATTGGTG GGAACGGTCA GTGGCGTAAG GTGCCGCTGG CGTTGTGGAA CCGTCAGCAT 
ATTGAACCCG CTGCGGGCGA AACGCTCTTT ATCGGTTTTA ACCCCGCGGT ATTACCCCAA 
GATATGTCAT CACTCAACGA TCAGCTTGCT GACTACCTTG CTAACCGGAC TCCACTCGAA 
TGA
 
Protein sequence
MLALNRIATL LLLVSGVATS AQLTVKSPQQ TIAVVKLDDG TRLEKFYEQV PWPQNINWQT 
AFISDFATTQ KVRAQGDVLL QKLAELETRW RNSGDGDLAI SAWLLRKTIN PINVAGRIST 
DLDPDRVRVY AENNRPLVGE YALYVAPHDD KLSLIGLVNT SADVGELETS GKVALRAGWS 
VENYLSGRRL IAGADNSYGY LIGGNGQWRK VPLALWNRQH IEPAAGETLF IGFNPAVLPQ 
DMSSLNDQLA DYLANRTPLE