| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1261 |
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| Symbol | |
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| ID | 8132198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1471711 |
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| End bp | 1472970 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644864551 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003016845 |
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| Protein GI | 253687655 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAT CCAAACACGA CGCCGTGCGC GCGTGTCTGG CGATGTTGCT GTGGCTGCCT
GCCGCCGTCT TTGCGGCAGA TCTGAGTCTT GAACAGGCAT TACAGGCGGC GGAACGCTAC
TCCGCCGATC TGTCCGCCAA TCAACACCAG ATTAACGCAC TACAGAACAT GGCCGACTCC
GCCACGCAGC TCCCCGATCC AAAGTTGAAA TTTGGTGTCG AAAATTTGCC ATTAGGTGGC
AACAACGGTA GCCGCCTCAC GCGGGAAGGA ATGACGATGC AGCGCATCGG CGTCATGCAA
ACCTACGTCA GCAGCCGTAA GCGCGATAGT AAGGCGCAGG CTATCCGGGT CGAAGCCGAC
GCGCTGCAAA GCAATAGTGA AAGTATCCGC GCTCGCCTGC AACGGGAAAC GGCACAGGCG
TGGCTGGATC TGGCACTCTC GCAAAAAGCG TTGGCCGAAG TCACCGCGCT GGTCAATGAA
AGCCAGCGAC AGGTCGCCTC ACAAAAAGCA AGCGTGGCGG CGGGCAGCGA AGCCAGTAGC
GTCCTGGATG CCCGTCTGAC GCTGGCAGCC ATGCAGGACA AACTGGCCGA CGCCGAGCGG
GATACGCGTA TCGCGCATGC ACGTTTGGTG CAGCTTACCG GCATGACGGA TATCAATGTG
CATGGCGAAC TGCCCCGCTT TGAACGTCTG CCAGCTTCAC CAGCAGTACT CAGCAGTGCC
ATTCACCAGC ACCCGGAAAT GCAGCAGGCA CAGCGTGAAG CCGAGCTGGC TCAGGCTCGC
TCGGCACAGT CAGCCGTCGC CGCCATCCCC AATGTCGATG TTGAAGTCTA TTACGCGAAA
CGCGGAGACA ATTACGACGA CATGGCGGGC ATGATGGTGA CGGTCGATCT ACCGCTGTTC
AAATCCAAAC GTCAGGATAA GGACTACGCC GCGGACGTCT CTCGCAGCAT GGAAGCGCGC
GACAAAGTCT TGCTCACCGA ACGAGAGCAT CAGGCGCAAC TCGATACGCT AATAGCTCAA
TATCAAGCCG CACAGTCACG CTGGCAGCGT CAGAACGGTG AGATTCTTCC GTTGCAACAG
CAGCGTATCA AACTGATTCA GGCTCAGTAT CAATCCGGCA GCAGTAGTCT CTCTGCTGTG
CTGGATGCCC GCCGGGCACT GCTCGAAAGC CGGATCGCGG TTCAGGATAC CGCCCGAGAG
ATGGCTCAAT ATTGGGCCGC CATCCGCTAT CTGACGCCAC AAGGAAGCCC TGCGCAATGA
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| Protein sequence | MNLSKHDAVR ACLAMLLWLP AAVFAADLSL EQALQAAERY SADLSANQHQ INALQNMADS
ATQLPDPKLK FGVENLPLGG NNGSRLTREG MTMQRIGVMQ TYVSSRKRDS KAQAIRVEAD
ALQSNSESIR ARLQRETAQA WLDLALSQKA LAEVTALVNE SQRQVASQKA SVAAGSEASS
VLDARLTLAA MQDKLADAER DTRIAHARLV QLTGMTDINV HGELPRFERL PASPAVLSSA
IHQHPEMQQA QREAELAQAR SAQSAVAAIP NVDVEVYYAK RGDNYDDMAG MMVTVDLPLF
KSKRQDKDYA ADVSRSMEAR DKVLLTEREH QAQLDTLIAQ YQAAQSRWQR QNGEILPLQQ
QRIKLIQAQY QSGSSSLSAV LDARRALLES RIAVQDTARE MAQYWAAIRY LTPQGSPAQ
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