| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1252 |
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| Symbol | |
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| ID | 8132189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1460574 |
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| End bp | 1461290 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644864542 |
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| Product | hypothetical protein |
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| Protein accession | YP_003016836 |
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| Protein GI | 253687646 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1811] Uncharacterized membrane protein, possible Na+ channel or pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000565892 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGGTC CGTTGATTAA TGGTGCTGCT ATCTTGATTG GTAGTGGCTT GGGCATTGTT
TTACGTCGCT TTATCCCTCA ACGCTTGCAG GATGGCCTTC CGCCAGCGTT TGCGATGGTG
TCGATTGCAA TGGGGATCAC GCTGGTTGTT AAAGTCCAGC AGTTGCCTGC GGTGGCGTTG
GCTATCGTAA TTGGCGTGGC GTTAGGCGAG CTGCTCCGCA TGGAGTCTGG TGTACAGTGG
GCTGGCACGA TGATTCAGAG AGGGCTAAAC CGCGTTCTGC CTGCACAAGA GCACCGCCTA
CCACAGGATG TCTACACTCA GAACTTTACT GCATTAATCG TTCTATTTTG TGCCAGCGGT
ACCGGCGTGG TGGGCGCATT GACGGAAGGA TTAACTGGTG ATTATCAACT GCTGATCATC
AAATCTGCTT TGGATATTTT TACCGCGCTG ATTTTTTCCA TCACGCTGGG TCTTGCTGTG
ATGTCGATTG CGATACCACA GGTTATTGTC CAGACGCTGC TGTTCTTCTC TGCCAAATTG
ATTATGCCCT TTATGACAGA TATCACGATG GGTGACTTTT CTGCCTGTGG CGGCATTATC
ATGATTGCGG TGGGGCTGAG GATCGCGCAG ATCAAATCCT TTGCGGTGGT TAATTTCCTG
CCTGCTTTGG TTCTGGTTAT ACCTATCTCG CTCTACTGGC ATCGCCTATT CGCCTAA
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| Protein sequence | MIGPLINGAA ILIGSGLGIV LRRFIPQRLQ DGLPPAFAMV SIAMGITLVV KVQQLPAVAL
AIVIGVALGE LLRMESGVQW AGTMIQRGLN RVLPAQEHRL PQDVYTQNFT ALIVLFCASG
TGVVGALTEG LTGDYQLLII KSALDIFTAL IFSITLGLAV MSIAIPQVIV QTLLFFSAKL
IMPFMTDITM GDFSACGGII MIAVGLRIAQ IKSFAVVNFL PALVLVIPIS LYWHRLFA
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