| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1247 |
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| Symbol | |
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| ID | 8132182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1455370 |
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| End bp | 1455795 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644864535 |
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| Product | colicin uptake protein TolR |
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| Protein accession | YP_003016831 |
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| Protein GI | 253687641 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.011625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGAG TACGCAGAGG CCGTCGTGAG CTGAAATCCG AGATCAACAT TGTTCCGCTA
CTGGACGTGC TGTTAGTGCT GTTGCTGATT TTTATGGCGA CTGCGCCGAT TATTACGCAG
AGCGTCGAGG TGGATCTGCC TGATGCGACC GATTCAAAAA CGGTCTCCAG CAACGACAAT
CCGCCCGTGA TCGTAGAGGT TTCAGGTATA GGGCAATATA GTCTGGTTGT TGAGCAAAAC
CGTATGGAGC AACTCCCGGC AGAGCAGGTG GTTGCCGAAG CGCAATCGCG ACTAGCAACC
AACCCTAAGA CGGTCTTTTT GATTGGTGGC GCGAAGGATG TTCCTTATGA TGAGATCATT
AAAGCGTTGA ATTTGTTGCA TCAAGCTGGC GTAAAATCCG TTGGTTTGAT GACACAACCG
ATTTAA
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| Protein sequence | MARVRRGRRE LKSEINIVPL LDVLLVLLLI FMATAPIITQ SVEVDLPDAT DSKTVSSNDN
PPVIVEVSGI GQYSLVVEQN RMEQLPAEQV VAEAQSRLAT NPKTVFLIGG AKDVPYDEII
KALNLLHQAG VKSVGLMTQP I
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