Gene PC1_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1227 
Symbol 
ID8132162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1433794 
End bp1434738 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content57% 
IMG OID644864515 
Producturea amidolyase related protein 
Protein accessionYP_003016811 
Protein GI253687621 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAG TTATCCATGC TGGATTGCAT ACTTCGGTGC AGGACGGTGG CCGTGTCGGT 
TTTCGCCGTT TGGGTATCAG CCAGTCAGGT GCGCTCGATC TGCCTGCTCT GACGATGGCT
AACCTGCTGG TGGGCAACGC AGAGAATGCG GCCGCGCTGG AAATTACGCT GGGCAAGTTT
ACCGCAACAT TCACTACCGC CTGCTGGGTG GCGCTGACTG GGGCAGACTG CCATGCCGAC
CTTGATGGCA AACCGCTCTG GACAGGCTGG CGTTTCGCCG TGAAGCCGGG ACAAACGTTA
AAAATGCGCA TGCCGCGTAA CGGAATGCGC AGCTATCTGG CCCTGTCCGG TGGCATAGAT
GTGCCGGAAG CACTCGGTTC GCGCAGTACC GATTTGAAAG CGAGTTTTGG TGGTTTTGAC
GGACGTTTGC TGATGGACGA CGATGAGCTT CCGCTGGGTA CGCCGACTCG TGAACTGACG
CGGGAAGTCG GCATTAAGCA GCTGTTGTTC AGCAACCGCG TGCGGGCATT GCCGGGGCCG
GAGTATCAGG AGTTCAGCGA AGAGATGCGG GAGCTGTTCT GGCGAACCTC CTGGCAGTTG
AGCCCGCAAA GTAACCGCAT GGGCTACCGT TTGCTCGGTG CTGAGCTACA GCGTTCTGCC
TTGTCAGGCA ACAAACCGCG CGAACTGCCA TCGCATGGAC TGCTACCGGG CGTCGTGCAG
GTTCCACACA ATGGTCACCC TATCGTACTG CTGGCGGATG CGCAGACAAC CGGCGGTTAC
CCGCGTATTG CGACGGTGAT CGAAGCGGAT TTATTCCATC TGGCGCAAAT CCGACTCGGT
GAACCGATCC ATTTTATTCA CTGTACGCAG GCACAAGCGC AAAAAGCGGG CGAGGAACAG
CGACGTTACC TCGAACAACT TGCATGGAGG CTACATGATT ATTGA
 
Protein sequence
MLKVIHAGLH TSVQDGGRVG FRRLGISQSG ALDLPALTMA NLLVGNAENA AALEITLGKF 
TATFTTACWV ALTGADCHAD LDGKPLWTGW RFAVKPGQTL KMRMPRNGMR SYLALSGGID
VPEALGSRST DLKASFGGFD GRLLMDDDEL PLGTPTRELT REVGIKQLLF SNRVRALPGP
EYQEFSEEMR ELFWRTSWQL SPQSNRMGYR LLGAELQRSA LSGNKPRELP SHGLLPGVVQ
VPHNGHPIVL LADAQTTGGY PRIATVIEAD LFHLAQIRLG EPIHFIHCTQ AQAQKAGEEQ
RRYLEQLAWR LHDY