Gene PC1_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1216 
Symbol 
ID8132151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1420520 
End bp1421104 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content56% 
IMG OID644864504 
Productpotassium-transporting ATPase, C subunit 
Protein accessionYP_003016800 
Protein GI253687610 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.551367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACGCGA TGCGCTATTT ACGTTCCTCT TTGTTTTTAT TCTTATTATT GCTGCTGTTT 
ACCGGCCTGG CCTACCCGCT GTTGACAACG GTGCTGGCAC AGTGGCTGTT TCCGACTCAG 
GCAAACGGAT CGCTGATTTA CCGTGACAAT GCCGCCGTGG GTTCATCCCT GATCGGACAG 
TCATTCAGTC GGGAGGGCTA TTTTCAGGGG CGTCCTTCCG CCACGTCAGA TGCGCCTTAT 
AACGCGCTGG CATCCGGTGG TAGCAATCTG GCCGCCAGCA ATCCGGCGCT GGACAAACAG 
TTCGTCGAAC GCGCTACGCG CTGGCATCAG TTGGTCGGCA ATCAACAGCC GGTGCCTGCT 
GAATTGTTAA CAGCATCCGG CAGCGGGTTG GATCCGCAGA TTTCCCCAGA AGCTGCGCGT 
TATCAGGCGC TCTACATCGC ACAGGCCAGA GGGATGTCGC TCCAGCAGGT ACAGCAATTG 
ATCGATCGCT TTACCGAAAC GAGTAAACCC GCGTTCATTG GGCAGCCGGC GGTCAATGTC 
CTGCTGCTGA ATCTGGCGTT GGATAAGGAA CCCCCCCTGC CCTAA
 
Protein sequence
MYAMRYLRSS LFLFLLLLLF TGLAYPLLTT VLAQWLFPTQ ANGSLIYRDN AAVGSSLIGQ 
SFSREGYFQG RPSATSDAPY NALASGGSNL AASNPALDKQ FVERATRWHQ LVGNQQPVPA 
ELLTASGSGL DPQISPEAAR YQALYIAQAR GMSLQQVQQL IDRFTETSKP AFIGQPAVNV 
LLLNLALDKE PPLP