| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1189 |
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| Symbol | |
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| ID | 8132118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1386725 |
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| End bp | 1387450 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644864471 |
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| Product | ABC transporter related |
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| Protein accession | YP_003016773 |
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| Protein GI | 253687583 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.703067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTCCC TGAAAAATGT TTCTAAATGG TACGGCCAAT TTCAGGTGCT AGCCGACTGC
TCCACAGAAG TAAAAAAAGG TGAAGTCGTA GTCGTCTGTG GGCCTTCTGG CTCCGGCAAA
TCAACCCTGA TTAAAACCGT AAATGGCCTG GAACCGATTC AAAAAGGTGA AATTACCGTC
AACGGGACTG CCGTTAACGA TAAAAAAACC AATCTGGCCC AGCTACGTTC CAAAGTCGGG
ATGGTGTTCC AACACTTTGA ACTGTTCCCG CATCTGTCGA TTATTGAGAA CCTGACGCTC
GCGCAGGTGA AAGTGCTAAA ACGCAAGCGT GAAGACGCCA AAGCGAAGGC GCAGAAACTG
TTGGAGCGCG TTGGTCTGGC TGCACACGCC AACAAGTATC CGGGTCAGCT TTCCGGTGGT
CAGCAACAGC GTGTCGCTAT CGCCCGTGCG CTGTGTATGG ATCCTATCGC GATGTTATTT
GATGAACCGA CATCTGCACT CGATCCAGAG ATGATCAATG AAGTGCTGGA CGTCATGGTT
GAATTGGCGC AGGAAGGCAT GACCATGATG GTCGTCACCC ATGAAATGGG CTTTGCCCGT
AAGGTGGCGC ACCGCGTGAT CTTTATGGAT GAGGGCAAAA TCGTTGAAGA CACCCGCAAG
GATGATTTCT TCAATAACCC ACAGTCCGAG CGCGCGAAAG ACTTCCTGGC GAAAATCCTG
CATTAA
|
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| Protein sequence | MISLKNVSKW YGQFQVLADC STEVKKGEVV VVCGPSGSGK STLIKTVNGL EPIQKGEITV
NGTAVNDKKT NLAQLRSKVG MVFQHFELFP HLSIIENLTL AQVKVLKRKR EDAKAKAQKL
LERVGLAAHA NKYPGQLSGG QQQRVAIARA LCMDPIAMLF DEPTSALDPE MINEVLDVMV
ELAQEGMTMM VVTHEMGFAR KVAHRVIFMD EGKIVEDTRK DDFFNNPQSE RAKDFLAKIL
H
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