| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1166 |
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| Symbol | |
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| ID | 8132095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1365754 |
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| End bp | 1366653 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864448 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003016750 |
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| Protein GI | 253687560 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.02159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAT CGATAAAACA ATTACGAGCC TTTATCGCGT TGACAGAAAC CGATAATTTC
ACGCGCGCTG CTCAGAAAAT AAATCTCTCT CAGCCAGCAT TTAGTTCATT AATCGCCGGG
TTGGAGGAAG AGGTCGGCTA TCGGCTATTT GATCGCGATA CACGTAAAGT GCAACTCAAC
GCCGATGGCC TTCATTTCAT TGATATTGCC CGTCGGCTGG TGCAAACCCA TGATGATGCC
GTCGGTGAGA TCAAGTCGTA TGCCACGGGG TACAAGGGGA AGATTGTGCT GGCGGTATTG
CCGTCAATGG CGGTGGAATG GTTGCCTCAG GTGCTGGCGC AATATCACCG TGCTTATCCC
AAGATTAAGG TTGAACTGCT GGATACGCAG TGGGATCGCT GCCTGAAGGC GGTGCTGGAT
GGACGCGCCG ATCTGGCGCT GACAGCAGGG CAGCCGTCGC CGGGAACGTT CAGCTCTCGC
ATGCTGTTTG CCGACAGTTT TTATCTGATC TGCCAGAACT CGCACCCGCT GGCGCAGCGC
GACAGTGTTG ATGTGACCGA TGTGGCGCAA TACCCGTTTG TCGGGTTTTG CAAAGGCACC
AGCATTCGGC AGTACACCGA TCAGCTTATC GAGCCGGAAG GTTTTAACTA CGTGCTGGAA
GTGCGTCAGT TGACCACCAT GATGGGGCTG GTGGCGGCAA ATTATGGCGT GAGTATTGTG
ACGGGGCTGA CGCTGTTCCA GTTTCAGCAC AAAGACATTG CGATTATCCC GTTTCGGGAT
TTATCGCTGC AGCGCGGTAT CTATCTGGTG ACGGATAGGG AGCGTCAGCT TTCAGTGTGT
GCGAAAGAGT TTTATGATTT TCTTCTGGAG CGGGCGGAAA GTTTTGTTCC CGCCGCGTGA
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| Protein sequence | MNLSIKQLRA FIALTETDNF TRAAQKINLS QPAFSSLIAG LEEEVGYRLF DRDTRKVQLN
ADGLHFIDIA RRLVQTHDDA VGEIKSYATG YKGKIVLAVL PSMAVEWLPQ VLAQYHRAYP
KIKVELLDTQ WDRCLKAVLD GRADLALTAG QPSPGTFSSR MLFADSFYLI CQNSHPLAQR
DSVDVTDVAQ YPFVGFCKGT SIRQYTDQLI EPEGFNYVLE VRQLTTMMGL VAANYGVSIV
TGLTLFQFQH KDIAIIPFRD LSLQRGIYLV TDRERQLSVC AKEFYDFLLE RAESFVPAA
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