| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1152 |
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| Symbol | |
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| ID | 8132081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1345803 |
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| End bp | 1348175 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864434 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003016736 |
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| Protein GI | 253687546 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC GTAATACTGT CTCTCCCGCT CTGGGGCTGA GTTTTAAGAA ACGCTTATTT
TTTACTAACA TGTTGGCGCT TAATTCTGCG CTATTCATCG GTGCGACGAC TGCTCCTGTG
AGCGTCTACG CGGCGGGTGA AAATGACACC GTGGCATTTT CTATTCCGGC TGGCGATCTG
CAAAAAGGCT TATTGGCTAT CGCCAATCAA AGCAAACAGA CGCTCTCTTT TAATCCTGCG
CTGGTGGCGA ATTATCAGAG TCCCGCGCTG AATGGCAATT ATTCAACGCG TCAGGCTATT
TTACGCTTAC TGCAAGGCAC GCCATTATTA TTAACAACAA CGGATAATGG CACGCTGACC
ATTGTGTCTT CCCGCGCCAA TGATGCGGAA GTGGCGCAGG CGAGTGACAA AACGCTGCCA
GCGATTACGG TCAGTGCCAG TAGCGAAGAC GAAACGGTAT TAAACCCCGG CACCTCATCT
TCTGCATTAC GCACCAGTAC GTCGTTGCAG CAAACGGCGC AGTCGGTTCA GGTGATCAGT
AATAAGTTGA TTACCGCCCG TCAGGCAACG TCGCTGGAAG ATGCGTTAAA AAACTCAGGT
AGTGTAGTGA CGGTGCAGTC TAACCGGGGT ACTCCCACCT ATTGGATTCG CGGTTTTAAC
GTGACATCGG GCGCGACGGA CGGTCTTGCC GGATCCAGCA ACGCCGGTAT TGGTCAGGGA
ACGGCTATCG ATGGTATCGA ACGTGTTGAG GTACTGAAAG GGCCGCAATC GGTATTGGCG
GGGAGCAGCT CTGCCGCAGG GACGATTAAC ATCGTGCGTA AAAAGCCTGT GGCGGAGACG
ATCCGGCGCG TTAAGGTTGA GGCCGCGCGT TATGGTGAAT TCAAAACTGC CATTGATCTC
GGCGGTGCGC TCACGGATGA CAAGGCTTTC AGCTACCGTT TAAATGCGTC TACCATGAAG
TCCAGTCAGT CTTATCCTGA CTTCAACGGC AACCACAACG ATTATTTGGC CCCGGCTTTC
TCATGGAAAG GGGACGCCAC ACGGCTGACG GTGGGGGCGG AAGTGAATCA GCTCCGAGAT
TCCGGCCCGG CAGGGACGTT CTACAATAAC GGGGCTGTAC AGAAACTCCC TGCCTACCGA
CTGGGTGACA AGGATGATCA TCACAAGCTG AAAACGACCA ATGCCTATTA CGAGTTTGAA
CAGGATCTGC TGCACGGCTG GACCTTCAAC AGTAAAGCCG GTTTCCAAAG CGCCTCAATA
CAGAACAAAA TGAATGAAAC GCTGCAAATC AATAATGATG GCAGCAAATT CAGTCACCCA
TTGGCCTATA AGTCCACCAA TCAGAACTGG AGCCTGCAAA ACGATTTCCG TGGCAAAGTG
GAGTTAGGGC CGATTACCCA AACGTTGCTG GTTGGACATG ATTACCAATA CGGACGCTTT
ACCAGCTACG ATGGCGACTT TACGTTGCTG ACCAACGGTA ATGTCTACAA CCCTGATTCG
CTGGCCTATC CTGGTATTGG TGAACCCACA CGGCAAACCT ATAACTCGAA GCTGATCCAG
AGTGGTTTCC TGTTGCAGGA TCAAATTGAT CTATGGGAAA GATGGCACGC TCAACTTGCT
CTGAAGCGCT CCAGTTGGAA TAACTCTTAT CTGGTGGGAA CGCGTCCTTC TAATTATTCC
TCCAGTAAAT GGATTCCAAA TTACGGTCTG AGCTTTGATA TTACGCCTGA TATTACGATT
TATGCCAACC TGCTGAACAG CTTCAGCGGT AATGCGCAGG TTAGCCGCAC GGGGGAAACG
ATGCCGCCGA CGACGGGTAA ATCCAAAGAA GCAGGGCTGA AATTCAATTT GCTGGATGAC
GACCTGACAT TAACGACCGC TTTTTTCAGC TTGAAACAGC AAAATCTGGT GGTGTTCCAG
AATGGGATTG CGGTCGGTAC GGAAGGGCGT GAAACACAAG GATTTGATGT CGATCTGAAT
GGCACCGTGC TGCCTGGATG GGATGTAACG GCCAGTTATA CCTATTCGGA TAACAAAGAC
CCGTCTGCGG TTCAGTCACA GGGATCGCCA CGTCATGCCA GCAATTTCTG GACATCCTAT
GAAATTCAGT CGGGGAGTCT ACAGGGCGCA GGTGCCTCTG TTGGGGTGAG TGGCACATCA
CGAGCCAGCA GTGGTCGTGG TACGCAATCC TTTGATATCG GTAGCCAATA CTCTACAGAT
GCGTCCGTCT TCTATCGTCA ACCGTCGTGG TCGCTGACGC TGGGCGTCAA TAACGTTTTC
GATCGCGATA TCTACTATCC ATCATCCACG CGTTCATGGG TGGGGGTAAA AGATGGTCGA
GTATGGCGTC TCACCGGGAC GTATTCGTTC TGA
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| Protein sequence | MKKRNTVSPA LGLSFKKRLF FTNMLALNSA LFIGATTAPV SVYAAGENDT VAFSIPAGDL
QKGLLAIANQ SKQTLSFNPA LVANYQSPAL NGNYSTRQAI LRLLQGTPLL LTTTDNGTLT
IVSSRANDAE VAQASDKTLP AITVSASSED ETVLNPGTSS SALRTSTSLQ QTAQSVQVIS
NKLITARQAT SLEDALKNSG SVVTVQSNRG TPTYWIRGFN VTSGATDGLA GSSNAGIGQG
TAIDGIERVE VLKGPQSVLA GSSSAAGTIN IVRKKPVAET IRRVKVEAAR YGEFKTAIDL
GGALTDDKAF SYRLNASTMK SSQSYPDFNG NHNDYLAPAF SWKGDATRLT VGAEVNQLRD
SGPAGTFYNN GAVQKLPAYR LGDKDDHHKL KTTNAYYEFE QDLLHGWTFN SKAGFQSASI
QNKMNETLQI NNDGSKFSHP LAYKSTNQNW SLQNDFRGKV ELGPITQTLL VGHDYQYGRF
TSYDGDFTLL TNGNVYNPDS LAYPGIGEPT RQTYNSKLIQ SGFLLQDQID LWERWHAQLA
LKRSSWNNSY LVGTRPSNYS SSKWIPNYGL SFDITPDITI YANLLNSFSG NAQVSRTGET
MPPTTGKSKE AGLKFNLLDD DLTLTTAFFS LKQQNLVVFQ NGIAVGTEGR ETQGFDVDLN
GTVLPGWDVT ASYTYSDNKD PSAVQSQGSP RHASNFWTSY EIQSGSLQGA GASVGVSGTS
RASSGRGTQS FDIGSQYSTD ASVFYRQPSW SLTLGVNNVF DRDIYYPSST RSWVGVKDGR
VWRLTGTYSF
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