Gene PC1_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1045 
Symbol 
ID8131974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1217400 
End bp1217978 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content51% 
IMG OID644864328 
Producthypothetical protein 
Protein accessionYP_003016630 
Protein GI253687440 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3056] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0122661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA AATTATTTTT CCCTCTACTG GCCGTAATTC TGCTTGCAGG CTGTGCAGCA 
AAAAGCAACA CGCTGAACAT CACGCCTAAA ATTAGCCTGC CTTCTCAGGA TCCGACGCTG 
ATGGGCGTAA CGATTAGCAT CAATGGTGCA GACCAGCGCG CCGACCAGGC TCTGGCAAAA 
GTGAATCGCG ACGGCCAGCT GATTACGCTG ACGCCTTCCC GCGATCTGCG CTTCCTGTTG 
CAAGAAGCGC TGGAGAAACA AATGACCGCG CGTGGTTATA TGATCGGCAC GGGCGGCCCG 
GTCGCTTTAC AGATTGTGGT TAACCACCTG TACGCCGATG TTTCTGAAGG AAACCTGCGC 
TACAACATCA CGACCAAAGC AGATATCTCC ATCATTTCTC AGGCAGCAAA TGGCAACAAG 
CAGGTGAAAA ACTACCGCTC AACCTATAAC GTTCAGGGCG CGTTCACCGC CAGCAACGAC 
AAAATCACCG ATGCGGTTAA CACGGTGCTA GGCGATGTTA TCAACGACAT GGCGCAAGAC 
ACCAGTGTAA GTAGCTTTGT CAAAGAAAAC GCCCGTTAA
 
Protein sequence
MLKKLFFPLL AVILLAGCAA KSNTLNITPK ISLPSQDPTL MGVTISINGA DQRADQALAK 
VNRDGQLITL TPSRDLRFLL QEALEKQMTA RGYMIGTGGP VALQIVVNHL YADVSEGNLR 
YNITTKADIS IISQAANGNK QVKNYRSTYN VQGAFTASND KITDAVNTVL GDVINDMAQD 
TSVSSFVKEN AR