| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0999 |
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| Symbol | |
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| ID | 8131928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1164935 |
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| End bp | 1166212 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864282 |
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| Product | nucleoside transporter |
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| Protein accession | YP_003016584 |
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| Protein GI | 253687394 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00889] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.501568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTA CAGCAAAGCT GTCGTTCATG ATGTTCGTTG AATGGTTTAT CTGGGGAGCC
TGGTTTGTTC CACTCTGGCT GTATCTGAGC AAAAGCGGGT TTACGGCGGG GGAAATCGGC
TGGTCGTATG CCTGTACGGC TATTGCCGCT ATCTTGTCGC CGATTCTTGT GGGGTCACTC
ACCGACCGCT TTTTTGCCGC GCAAAAGGTG CTGGCCGTAC TGATGTTCGC TGGCGCGATA
CTGATGTACC TGGCGGCGCA GCAAACAGAA TTCATGTATT TCTTCCCGCT GCTATTGGCG
TATTCGCTGA CCTATATGCC TACGATCGCC TTGACTAACA GTATCGCTTT CTCGCATGTT
GCCGATGTAG AACGAGATTT CCCACGCATT CGCGTATTGG GCACGATCGG TTGGATCGCC
TCTGGTATCG TCTGCGGATT TCTACCGACG TGGCTTGGAT TTAGCGATAT CTCTCCCACC
AATATTCCGT TACTGATTAC GGCCGCCAGT TCTGCGTTGC TCGGTTGCTT TGCGCTTTTC
CTGCCCAATA CGCCACCGAA AAGCACCGGC AAGCTGGATG TTAAAGTCAT GCTGGGGCTG
GACGCAGTGG TGTTGCTGAA AGACAAAAAC TTTCTGGTGT TCTTTGTCTG CTCCTTCTTG
TTCGCGATGC CACTGGCGTT TTATTACATT TTTGCCACCG GCTTCCTCAC TGAAGTCGGC
ATGAAAAATG CGACGGGCTG GATGACGTTG GGCCAATTCT CAGAAATTTT CTTCATGCTG
GCACTACCGT TTTTCACCAA GCGTTTTGGT ATTAAAAAGG TATTGCTACT GGGACTGATT
ACGGCAGCGA TCCGCTATGT GTTCTTCGTC TACGGCGATG CTTACCACTA CTTCACGTAT
GCGCTGCTGT TCCTCGGCAT TCTGTTGCAC GGCGTGAGTT ACGATTTTTA CTATGTTACC
GCCTATATCT ACGTTGATAA AAAAGCGCCG GTGCATATGC GCACGGCGGC GCAGGGGCTG
ATTACGCTCT GCTGTCAGGG ATTCGGCAGC CTGTTGGGAT ATCGTCTGGG TGGGGTGATG
ATGGAGAAAC TTTTCGCCCA TGGCGAGCCG GTTAACGGCC TGACCTTCAA CTGGACTGGC
ATGTGGCTGT TTGGCGCGGT GATGATCGCG ATTATTGCGC TGATCTTTAT CCTGTTTTTC
CGTGAATCGG ATAAGACGAT CTCGACAATT GATGTAGACG GTGCAAATCA GCATTTCAGT
ACAGAGGAAA ACAAATGA
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| Protein sequence | MKTTAKLSFM MFVEWFIWGA WFVPLWLYLS KSGFTAGEIG WSYACTAIAA ILSPILVGSL
TDRFFAAQKV LAVLMFAGAI LMYLAAQQTE FMYFFPLLLA YSLTYMPTIA LTNSIAFSHV
ADVERDFPRI RVLGTIGWIA SGIVCGFLPT WLGFSDISPT NIPLLITAAS SALLGCFALF
LPNTPPKSTG KLDVKVMLGL DAVVLLKDKN FLVFFVCSFL FAMPLAFYYI FATGFLTEVG
MKNATGWMTL GQFSEIFFML ALPFFTKRFG IKKVLLLGLI TAAIRYVFFV YGDAYHYFTY
ALLFLGILLH GVSYDFYYVT AYIYVDKKAP VHMRTAAQGL ITLCCQGFGS LLGYRLGGVM
MEKLFAHGEP VNGLTFNWTG MWLFGAVMIA IIALIFILFF RESDKTISTI DVDGANQHFS
TEENK
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