| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0995 |
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| Symbol | |
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| ID | 8131924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1160551 |
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| End bp | 1162197 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864278 |
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| Product | multidrug transporter membrane component/ATP-binding component |
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| Protein accession | YP_003016580 |
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| Protein GI | 253687390 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.64415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTGC TCCGCATCGT TTACCAACAA TACCGTTGGC CCTTTCTTGC CGTTATCCTG
TTAAGTTTGT TGAGTGCCGC ATTGGGCATC GGACTTATTG CCTTTATCAA CCTGCAATTG
ATTGAAACGG TCAATCAATC GTTGAGTGTG TTGCCGCAAT TTTTGGGCTT GCTGCTGCTC
CTGATGGGCG TGACGTTGGT GTCACAACTG GCGTTGACCA CGCTGGGGCA CCATTTCGTT
TATCGTCTGC GTGGGCAATT TATCAAGCGT ATTCTGGACA CCAATATTGC GCGTATCGAG
CAGATCGGCA GTGCGCAACT GCTTGCCAGC CTGTCCAGCG ATATCCGCAA TATCACGATT
GCGTTTGTGC GTCTGCCGGA ACTGATTCAG GGCATCGTGC TCACCATCGG TTCTGCGGCT
TATCTGGCCT GGCTCTCCCC GAAAATGCTG GTGGTGACGT CCGTTTGGAT TGCGATAACG
CTCTGGGGCG GGTTTATGCT GGTTTCCCGC GTGTATAGCC ATCTTACTCA GGTGCGGGAA
GCGGAGGATC GTCTCCAGAA AGATTACGAA ACCGTGATTA ACGGGCGTAA GGAACTGACG
CTTAATCGTG AACGGGCGCA GAAGCTGTAT GAAGAGGTTT ATCAGGCCAA TGCGCAGGAT
TACCGACAGA ACGTGATTCG TGCCGATACC TTTCACCTCA GTGCGGTGAA CTGGTCGAAT
ATTATGATGC TGGGCGTGAT TGGCGCGGTC TTTTTCATGG CAAACAATCT TGGCTGGGCG
GATACCAATG TTGCCGCGAC ATACTCATTG ACGCTGCTTT TTTTACGCAC GCCGATGCTA
CAGGCCGTTG GCGCGCTACC GACGTTGCTG AGTGCGCAAG TCGCGTTCAA TAAGTTGAAA
CGTTTCGATT TAGCGGATTA TCAGGAACCG TTTTCCGCTG CCATTGCCCC TGCGGATTGG
CAGGCGCTGG AACTGCGTGA TGTGGTGTTT CGTTATGACG ATTCCGGGTT TGAAGTCGGG
CCGATCAATC TGGTGATAAA GCGTGGCGAA CTGGTGTTTT TGATTGGCGG TAACGGAAGC
GGAAAATCGA CGCTGGCGAT GCTGCTGACA GGGCTCTATA CCCCGGTTTC CGGCTCGTTG
CTGCTGGATA ACCGTCCCGT CACGGCGGAA ACGCGAGCGG ATTACCAAAA GCTATTTTCT
GCCATTTTTA CCGACTTCCA CCTGTTTGGG CAGATGATGG GCCCGCAGGG AACAGTACCG
GATACGGCGC TGGTCGACAG CTGGCTGGAT CGTCTGAACA TGCGGCATAA GCTGACGCTG
GAGCATCATC AGGTGATGAA TTTACAGCTT TCTCAGGGGC AGCGTAAGCG TGTTGCGCTG
CTGCTGGCTG TTGCCGAACA GCGGGACATC CTGCTGCTGG ATGAATGGGC TGCCGATCAG
GATCCGCAAT TCCGCCGCGT GTTCTATCTT GAGCTGTTAC CGCAACTACG CGCACTGGGG
AAAACGATTG TGGCGATCAG CCATGACGAT CACTACTTTG AACATGCCGA TCGCCTGCTT
GAAATGCATC AGGGGACGCT GTCTGAACTG ACAGGCGACG CGCGTGAACA GGCCTCGCAG
GATGCGGTGG CGCAGATTAG CCGGTAA
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| Protein sequence | MELLRIVYQQ YRWPFLAVIL LSLLSAALGI GLIAFINLQL IETVNQSLSV LPQFLGLLLL
LMGVTLVSQL ALTTLGHHFV YRLRGQFIKR ILDTNIARIE QIGSAQLLAS LSSDIRNITI
AFVRLPELIQ GIVLTIGSAA YLAWLSPKML VVTSVWIAIT LWGGFMLVSR VYSHLTQVRE
AEDRLQKDYE TVINGRKELT LNRERAQKLY EEVYQANAQD YRQNVIRADT FHLSAVNWSN
IMMLGVIGAV FFMANNLGWA DTNVAATYSL TLLFLRTPML QAVGALPTLL SAQVAFNKLK
RFDLADYQEP FSAAIAPADW QALELRDVVF RYDDSGFEVG PINLVIKRGE LVFLIGGNGS
GKSTLAMLLT GLYTPVSGSL LLDNRPVTAE TRADYQKLFS AIFTDFHLFG QMMGPQGTVP
DTALVDSWLD RLNMRHKLTL EHHQVMNLQL SQGQRKRVAL LLAVAEQRDI LLLDEWAADQ
DPQFRRVFYL ELLPQLRALG KTIVAISHDD HYFEHADRLL EMHQGTLSEL TGDAREQASQ
DAVAQISR
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