| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0922 |
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| Symbol | |
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| ID | 8131851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1069912 |
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| End bp | 1072170 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864206 |
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| Product | Trimethylamine-N-oxide reductase (cytochrome c) |
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| Protein accession | YP_003016508 |
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| Protein GI | 253687318 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.433061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATGA AACGTTATCC GCATCTTGCG CATTGGGGCG CGTTTACCGC TGTGGTGGAA
GACGGCAGGC TGATTCGATG TGAGCCGTTT TCCGACGATC CGGCACCTTC CGCCATGCTC
GATTCCATCG CGCCGCTGGT GTATTCCGAC CGGCGCATCC GTCGGCCTTC GGTGCGACGT
TCCTGGCTTC AGAAACGTGA AAATAGCGAC AGAACGCTAC GTGGTCGGGA AGATTTTGTT
GAAGTTGATT GGGATGTGGC GCTCGATCTG GTCGCACAGG AGAATCACCG TATTCGCGAT
CGCTACGGCG CAGACGGCAT TTTTGCCGGT TCCTACGGCT GGTCGTCTGC CGGTCGCTAT
CACCATGCAC GTTCTCAGGT GCGACGCTTC TATTTCTCCG GCGGTGGTGC GGTCGATCAG
CAGGGGAATT ACAGCTGGGG CGCGGCGCAG TTCTTCTTGC CGTATGTGAT TGGTACTTTT
CATCCACTGA CTGGCAAGGT GACGGAATGG CGCAGCGTCG CCGAACACTG TGATATTTTC
CTCGCGTTTG GCGGCCTTGC GTTGAAAAAT GCGCAGGTGG CATCCGGCGG TGCCGGGCAC
CATACGCTTA AGCCTGCGCT GGAAACGTTA GTCGCGAAAG GGATTCCGGT CATTAACATC
AGCCCGATGC GTGATGACTG CCCTGAGTTT GTGAACGCTG AGTGGATTCC TATTCGCCCG
AATACCGATG TCGCTCTGAT GCTGGCATTG GGCTATGAGA TTCAGCGTTT GGGCGCTGAC
GATAAAGATT TCCTGCAACG CTACTGTGTT GGCTACGAAC AACTGAGCGA CTATTTGCAC
GGCCGCGGCG ATGGCGTGGT GAAAACGCCT GAATGGGCCA GCGACATCAC GGGCATTCCC
GCCGAGCGTA TCCGGCGTCT GGCGCAGCAA CTGATTGGCG TGCGCAGCTT TATTACCTGT
TCTTACTCCG TGCAGCGCGC CCATCGTGGC GAGCAGCCGT ACTGGATGAT GATTGCGCTT
TCGTCAATGC TGGGACAAGT GGGCTTACCG GGGGGCGGCT TCTCCTTCGG CCACGGTTCG
ATGAATAGCG TCGGAAACGA ACGTATTTCA ACGCCTGCGC CGGCTTCGCC ATCCAGCCCG
AATGCAGGTC GGGCGATCCC CGTGGCGCGC ATCGCCGATA TGCTCTTGCA TCCCGGCACG
CCTTATACCT TTCAGGGCGA AACCCATACT TATCCCGATA TTCATCTGAT TCACTGGGCG
GGCGGTAACC CGTTCCATCA TCATCAGCAG TTGAACCGTC TGGTAGACGG CTGGCGCAAA
CCGGATACGG TGATTGTGCA GGATATCGTC TGGACACCAG CGGCGCAGAT GGCTGACATC
GTGCTGCCTG TTACCACCAC GCTGGAGCGT AATGACATCG GCGGCTCGTC CCGCGATCGC
TTTATTTTTG CCATGCATCA GGCGATTGCG CCGCAGCATC AGGCGCGTAA TGACGTGGAT
ATCTTCAGCG AGCTGGCGGA ACGTTTGGGT TATGGCGATG TGTTCACGCA AAATCGCAGT
GAGCGGCAGT GGCTGGAACA CCTTTATGAC GAGTGCCGTT CAAGGCAGCG AGCCGTTGCC
GACAGTTGGC CGTCATTTGA GGATTTCTGG CAGCAGGGAC ATGTAGAAAT CCCGATGGAT
GAAAAGCCGT TTGTATTCTT TGAGGACTTC CGCCGCGATC CGCAGCAGCA TGCGCTCAGT
ACGCCCAGCG GTAAAATAGA ACTGTTCAGC TCCGCGATTG CCAGCTATGG CTATGCCGAT
TTTGCACCGC ACCCTGAGTG GCAGCCTCCC GTTGAATGGC TGGGAGCAAA AAGTTCGGAA
GAATGGCCGC TGCACTTTAT TTCCATTCAG CCGTCTGACC GCTTGCATAG CCAACTTGCC
GCGACGCCGC AGGTTGCCGC GAATAAAACC GCAGGAAAAG AGACGCTTTA CATGCACCCG
CAGGATGCTG CTGCGCGGGA TATCGCCGAC CGTTCACAGG TGGAAGTCAG AAATGCGCGT
GGTCGTATTC TGGCTGGCGT TCAGATTACT GACGGCGTCA CGCCGGGCGT GGTGATCATG
TCCACCGGTG CCTGGTTTGA GCCGGGATTT GGGCAGAAAA CGTGGCACCC GGTTGAGCAG
TCTGGCAATG CGAATGTACT GACGCTGGAT ATTGGCACGT CGCCACTGAC ACAGGGGCCG
AATGCCATGA GCTGTCTGGT GGATGTCGTG CGGGTTTAG
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| Protein sequence | MAMKRYPHLA HWGAFTAVVE DGRLIRCEPF SDDPAPSAML DSIAPLVYSD RRIRRPSVRR
SWLQKRENSD RTLRGREDFV EVDWDVALDL VAQENHRIRD RYGADGIFAG SYGWSSAGRY
HHARSQVRRF YFSGGGAVDQ QGNYSWGAAQ FFLPYVIGTF HPLTGKVTEW RSVAEHCDIF
LAFGGLALKN AQVASGGAGH HTLKPALETL VAKGIPVINI SPMRDDCPEF VNAEWIPIRP
NTDVALMLAL GYEIQRLGAD DKDFLQRYCV GYEQLSDYLH GRGDGVVKTP EWASDITGIP
AERIRRLAQQ LIGVRSFITC SYSVQRAHRG EQPYWMMIAL SSMLGQVGLP GGGFSFGHGS
MNSVGNERIS TPAPASPSSP NAGRAIPVAR IADMLLHPGT PYTFQGETHT YPDIHLIHWA
GGNPFHHHQQ LNRLVDGWRK PDTVIVQDIV WTPAAQMADI VLPVTTTLER NDIGGSSRDR
FIFAMHQAIA PQHQARNDVD IFSELAERLG YGDVFTQNRS ERQWLEHLYD ECRSRQRAVA
DSWPSFEDFW QQGHVEIPMD EKPFVFFEDF RRDPQQHALS TPSGKIELFS SAIASYGYAD
FAPHPEWQPP VEWLGAKSSE EWPLHFISIQ PSDRLHSQLA ATPQVAANKT AGKETLYMHP
QDAAARDIAD RSQVEVRNAR GRILAGVQIT DGVTPGVVIM STGAWFEPGF GQKTWHPVEQ
SGNANVLTLD IGTSPLTQGP NAMSCLVDVV RV
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