| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0886 |
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| Symbol | |
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| ID | 8131812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1029046 |
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| End bp | 1029762 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864167 |
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| Product | phosphonate metabolism transcriptional regulator PhnF |
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| Protein accession | YP_003016472 |
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| Protein GI | 253687282 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCAGT TGTCCAGACC TCCGACCACT CTCTATCAGG CGATTGCCGC CCGGCTAGAA
GAAGCGCTAC GCGAACGCTA CAAATGTGGC GACTATCTTC CTTCTGAGAA GCAACTGGCT
ACGCACTACG CCGTTAACCG CCATACGTTA CGCCGGGCAG TGGATGACCT GGTGAAAAAA
GGGCTGGTTC AACGCCGTCA TGGTGTGGGT ATTTTGGTGC TTATGCGGCC TTACGACTAC
CCGCTGCATA CGCAGGCTCA CTTTAGCCAG AACCTGTTGG ATCAAGGCAG TTGCCCTTCC
AGCGAACGAT TGCTGGCCAT GCTGAGTCCG GCGAGTCAAG AGATTGCCAC CGCACTGGGC
TGTGATGAAG GCGATAGCGT CATCCATTTG CGCACACTGC GTCGGGTTAA TGGTATTCCG
GTCTGCGTTA TTAACCACTT CCTGCCCAAC CTTTCCTGGT GGCCACATCT ACAGCAGTTC
ACTCGCGGCT CACTGCACGA CTTTATTATC GAGCGGCTAA ATCAGGCGCT GGTTCGCACG
CAAACGCGCA TCAGCACGCG GCTGGCTCAG GCTAAGGAAA GCCGACTGTT GGAAATCGAT
GCGCAGTCTC CACTGCTGTG TTTACGCACG CTGAATAAAA CCGCAAACGG TGAGATCGCC
GAGTACTCCA TCAGCCTGAC CCGTGGCGAT ATGATCGAAC TGACGCTGGA GCACTAG
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| Protein sequence | MMQLSRPPTT LYQAIAARLE EALRERYKCG DYLPSEKQLA THYAVNRHTL RRAVDDLVKK
GLVQRRHGVG ILVLMRPYDY PLHTQAHFSQ NLLDQGSCPS SERLLAMLSP ASQEIATALG
CDEGDSVIHL RTLRRVNGIP VCVINHFLPN LSWWPHLQQF TRGSLHDFII ERLNQALVRT
QTRISTRLAQ AKESRLLEID AQSPLLCLRT LNKTANGEIA EYSISLTRGD MIELTLEH
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