| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0865 |
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| Symbol | |
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| ID | 8131790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1007060 |
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| End bp | 1009504 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864146 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | YP_003016452 |
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| Protein GI | 253687262 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.173727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATCA AAAAAACTGA ACTTTACTCC TCTCTTTGGG CAAGCTGCGA CGAACTGCGC
GGCGGGATGG ATGCCAGCCA GTATAAAGAC TATGTGCTGA CCCTGCTGTT TATGAAGTAT
GTCTCTGATA AATATAAAGG CGATCCCTAC GGGATGATCG TTATCCCGCA AGGGACCAGC
TTTGACGATA TGGTCGCGTT GAAAGGCGAC AAAGAGATCG GCGACAAAAT TAACAAGATT
ATCCAGAAAC TGGCGGCTGA GAACGATCTG AAAAGCGTGA TTGACGTGGC CGATTTTGAC
GATGAAGACA AACTCGGCAA AGGCAAAGAG ATGATTGACC GTCTGTCGAA ACTGGTCGGC
ATCTTCGAAG GGCTGGATCT GTCCGGCAAC CGGGCCGAAG GCGACGATCT GCTGGGGGAT
GCCTATGAGT ATCTTATGCG CCACTTCGCC ACTGAGTCCG GCAAGAGCAA GGGGCAGTTT
TATACCCCGG CGGAAGTGTC ACGCATTCTG GCGAAAGTGA TCGGCATTAC GCCTGAAACA
CCACAGGATG CGACAGTGTA CGACCCGACC TGCGGCTCCG GTTCGCTGCT GCTGAAAGTG
AACGATGAAG CCCGACGCGG ACTGTCTATC TATGGGCAGG AGATGGACAA CGCCACCAGT
GCGCTGGCGC GGATGAACAT GATCCTGCAC AACAACACGA CAGCCAAGAT CTGGAAAGGT
AATACGCTAA GCGATCCGCA GTGGAAAGAG GCCAACGGCC GGCTGAAAGC CTTCGACTTC
GCCGTGGCAA ACCCGCCGTT TTCCAATAAA AACTGGACCA GCGGGCTGAA TCCGAAAAAA
GATCCGTTTG AACGCTTCGT CTGGGGTACT CCGCCGGAGA AGAACGGCGA CTATACCTTT
TTGCTACATA TCATAAAGAG CCTGAAAAGC ACCGGCAAAG GCGCGGTGAT CCTGCCGCAC
GGCGTGCTGT TCCGCGGTAA TGCCGAGGCG ACCATCCGCG AAAACCTGAT CAAGCAAGGC
TATATCAAAG GCATTATCGG CTTACCGGCC AACCTGTTTT ACGGTACCGG CATCCCGGCG
TGCATTATCG TGATTGACAA AGAACACGCA CACAGCCGCA AAGGCATTTT TATGATCGAT
GCCAGCCGGG GCTTTATCAA GGATGGCAAC AAGAACCGCC TGCGCAGCCG GGATATACAC
CGCATCGTGG ACGTGTTCAA CCACCAGCGC ACGGTGCCCG GCTACAGCCG GATGGTGCCG
GTCAGCGAAA TCGCCAGTGA ACAGAATGCT TATAACCTGA ATATCCCTCG CTATATTGAC
AGCGGCGAGC CGGAAGATTT GCACGATCTG ACTGCACACT TGCAGGGCGG TATTCCGATG
CGCGATGTCG ATGCCTTACA GGACTACTGG CAGGTGTTTC CTGCCCTGCG CGACGTGCTG
TTTACAGACG ATCGCCCCGG CTACTGTCGG GCGCGGGTCG AAACGCAGCA GGTTAAACCC
ACTATTCTGG CGCATCAGGA GTTTAAGGAT TTCGCCACCC GCACCCTGCT GCCGTTTAAG
GCATGGGTGA AAGAGTCGGC GCTGGATGGC ATTGACAAAG GTGATAAACC GAAAGAACAG
ATACAGGATA TCGGCGAAAT GTTGCTGGCG CACTACGCCA ACAGTGAACT ATTGAATAAA
TACAGCGCGT ACCAAATTTT AATGGACTAC TGGTTCGACA CCATGCAGGA CGATGTTTAC
GTGATTACGC AGGACGGCTG GAAAGCCGCC GCGCAGATCC GCGAACTCCA GCCGGTGAAA
GGCAAGGACG GCAAAAACGT CTGGAAAGAA GCGCACGACT TCGAGTTTAC CAAACGGCGC
TATAAGGCCG ACGTTTTACC TCGCTCGCAG ATAGAGAAAC GCTGTTTCCC GGCATTGCTG
GAAGCGCTGA ACAGCGCGCA GGAACGCAGC GAGGAAGCCA GCCGTCAGTT AGCCGAGTTC
ATTGAAGAGC AGGCTGGTGA AGACGATTTG CTGGCAGAAG CGAAGAATGA CAAAGATAAG
GTGACGCAAA AACTGGTGAA TGCCCGCCTG ATCCACCTGA AGAAAATCAC CGCCGATCCG
GATGAACTGG CGGCGCTGAC CCGCTGTCTG GCGCTGATTA AGGCAGAAGC CAGTGCGAAA
AAAGCGCAGA AAGCCGCACA GGAAGCGCTA GATCGCGCCG TGTTTAAGCA TTACCCCACG
CTGGACGAAC CGGCAATCAA AACGCTGGTA GTGCAGGACA AATGGCTGGC CACCTTGCAG
GCCGGGATTA AGGCAGAGAT CGAGCGTATC ACCCAGCAAC TGGCTGAACG CGTGAAGGAA
CTGGAAGAGC GTTATTCGGA ACCACTGCCG GCGCTGGAAG CATCCGTTGA GGCATTGAGC
GAAAAGGTAG CCGGGCATTT GCGGGCGATG GGGCTGGTGT GGTGA
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| Protein sequence | MAIKKTELYS SLWASCDELR GGMDASQYKD YVLTLLFMKY VSDKYKGDPY GMIVIPQGTS
FDDMVALKGD KEIGDKINKI IQKLAAENDL KSVIDVADFD DEDKLGKGKE MIDRLSKLVG
IFEGLDLSGN RAEGDDLLGD AYEYLMRHFA TESGKSKGQF YTPAEVSRIL AKVIGITPET
PQDATVYDPT CGSGSLLLKV NDEARRGLSI YGQEMDNATS ALARMNMILH NNTTAKIWKG
NTLSDPQWKE ANGRLKAFDF AVANPPFSNK NWTSGLNPKK DPFERFVWGT PPEKNGDYTF
LLHIIKSLKS TGKGAVILPH GVLFRGNAEA TIRENLIKQG YIKGIIGLPA NLFYGTGIPA
CIIVIDKEHA HSRKGIFMID ASRGFIKDGN KNRLRSRDIH RIVDVFNHQR TVPGYSRMVP
VSEIASEQNA YNLNIPRYID SGEPEDLHDL TAHLQGGIPM RDVDALQDYW QVFPALRDVL
FTDDRPGYCR ARVETQQVKP TILAHQEFKD FATRTLLPFK AWVKESALDG IDKGDKPKEQ
IQDIGEMLLA HYANSELLNK YSAYQILMDY WFDTMQDDVY VITQDGWKAA AQIRELQPVK
GKDGKNVWKE AHDFEFTKRR YKADVLPRSQ IEKRCFPALL EALNSAQERS EEASRQLAEF
IEEQAGEDDL LAEAKNDKDK VTQKLVNARL IHLKKITADP DELAALTRCL ALIKAEASAK
KAQKAAQEAL DRAVFKHYPT LDEPAIKTLV VQDKWLATLQ AGIKAEIERI TQQLAERVKE
LEERYSEPLP ALEASVEALS EKVAGHLRAM GLVW
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