| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0858 |
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| Symbol | |
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| ID | 8131783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 998562 |
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| End bp | 999821 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864139 |
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| Product | integrase family protein |
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| Protein accession | YP_003016445 |
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| Protein GI | 253687255 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACTG ACAGCAAAGT CCGATCCGCG AAACCTCTCG CAAAATCTTA CAAGCTCACT
GACTCGCAAG GCCTGTACCT CACGGTATCT ACCAGCAGCG CTAAGTTATG GTATTTCCGC
TATCGCTTCG GCGGTAAAGA GAACCGTCTG GCCTTTGGCC CCTACCCTCA AATCACACTG
GCAGAAGCCC GCGAAAAGCG CGATGCGGCG CGTAAACTGC TGGCGTCCGG CATTAGTCCT
TCTCAGCTTC GTAAATCGAA CAATCCCGCC GTTGATGAAT CCCACACCTT TCAGTATGTC
ACAATGGCGT GGCACAGCAG TTGCCTCAAA CTCTGGTCGG AAGCCCATGC CGATAAAATT
CTTACCTGCC TAAAACGCTA CGTTTTCCCC GCCATTGGTG CGATGGATAT CGTGCAGGTT
GAAACCCGCC ATCTTGCGCA GTTGGTTAAG GCGATTGACG ATAAAGGCGT GCATGACGTC
GCCGGACGGG TACGCCAGCA TCTGACCAAA ATCATGCGCC ACGCCGTCCA GCAGGGCGTG
ATTAAATATA ATCCTGCTTA CGATTTGGAT GGCGTCGTGA CCCCGGTAGC GACCCAACAT
CACCCCGCCC TGCCACTAAA ACGCCTGCCT GAACTGCTGG GGAAGATGGA GAACTACAAA
GGCCGGATGC TGACCCGTAT GGCGCTGGAG CTGAATCTGC ATGTTTTCCT GCGCTCCAGC
GAACTCCGTT TTGCCCGCTG GGATGAATTC AACCTCAAAG CGCATATCTG GAGCGTGCCT
GCCCAGCGCG AGGCAGTAAA CGGCGTGCGG TTCTCAGAGC GTGGTGCAAA GATGAAGGAT
GAACATCTGG TGCCGCTGTC ACGGCAAGCG GTCGCCCTGC TGAAACAGAT TCAGGCGATT
TCCGGCGAAT CGGTCTTCGT TTTTCCCGGC GCGCATACCC TGAACAAGCC GATGAGTGAG
AACACCATCA ACAAGGCGCT GCGCGTGATT GGTTACGACA CCAAAACCGA GGTATGCGGC
CACGGTTTCA GAACCATGGC CTGTAGCGCC CTGAACGAGT CCGGACGCTG GTCAAAGGAT
GCCATTGAGC GGCAGATGAG TCACAAAGAA CGCAACGGCG TGCGGGCGGC TTACGTGCAT
AAAGCCGAGC ATCTGGAAGC CAGAATCGAG ATGATGCAAT GGTGGTCGAA TTATCTGGAC
GTTAACCGCG ACGGCTACGT CGCACCGTAT ATTTATGCGC GAAGTTATAC GGCTGGCTAA
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| Protein sequence | MLTDSKVRSA KPLAKSYKLT DSQGLYLTVS TSSAKLWYFR YRFGGKENRL AFGPYPQITL
AEAREKRDAA RKLLASGISP SQLRKSNNPA VDESHTFQYV TMAWHSSCLK LWSEAHADKI
LTCLKRYVFP AIGAMDIVQV ETRHLAQLVK AIDDKGVHDV AGRVRQHLTK IMRHAVQQGV
IKYNPAYDLD GVVTPVATQH HPALPLKRLP ELLGKMENYK GRMLTRMALE LNLHVFLRSS
ELRFARWDEF NLKAHIWSVP AQREAVNGVR FSERGAKMKD EHLVPLSRQA VALLKQIQAI
SGESVFVFPG AHTLNKPMSE NTINKALRVI GYDTKTEVCG HGFRTMACSA LNESGRWSKD
AIERQMSHKE RNGVRAAYVH KAEHLEARIE MMQWWSNYLD VNRDGYVAPY IYARSYTAG
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