| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0854 |
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| Symbol | |
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| ID | 8131779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 995981 |
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| End bp | 996199 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864135 |
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| Product | plasmid maintenance protein CcdA |
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| Protein accession | YP_003016441 |
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| Protein GI | 253687251 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5302] Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.397758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACACC GCGTCAGCGT TACCGTGGAC AAAGACAATT ATCAGGTTCT GAGTGCTGCC
GGAGTCAATA TTTCCGGGCT GGTGAATGAG GCCATTGGCA AAGAAGCCCG CCGCATCAAG
GCTGAGGAAT GGAAGAAGGA AAACCGTGAA GGGATGGAAG AAGTCGCCCG ATTTATCGCA
CTGCATGGCT CTTTTGCGGA TGAAAACAGG AACTGGTGA
|
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| Protein sequence | MKHRVSVTVD KDNYQVLSAA GVNISGLVNE AIGKEARRIK AEEWKKENRE GMEEVARFIA
LHGSFADENR NW
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