Gene PC1_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0829 
Symbol 
ID8131754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp968855 
End bp969427 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content49% 
IMG OID644864111 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003016417 
Protein GI253687227 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGA CAACGAAAGC GCTCAAAGAC AAAATCCTTG ATGGCGCAAT CGAGCTATTT 
ATTGAGAAAG GCATAGAGAA AGTGACGACG CGTGAACTGG CGGAACACGT TGGTATTTCA 
CGCAGTCATA TTTATCACTA CTTTCCTGAC TGGCAGACGC TGTCGATTGA GGCGCTAACG 
GCATTCATGC TGGCGGATTT GGCAGACGTC GCGGCGGACA TCGCCACATT GCCGCCGAAA 
GAGAAACTGC ATGAGCTGGT GAAAAATTAC CTGCCGGATA CCACTGACGT CATCTGGAAT 
CTGTATGGAT CGCTATGGCA GCTGGCCGTT CACAACACCG CTTACGCTGA ACTCGCCCAC 
GTCATGACAG GGAAATGGTC TGCCTTACTG GAAGAGATTA TTGCATCAGG CGTCGCGTCC 
GGTGCCTTTA AAAATGCCGA TATTCAGCGC GTTTCTCGCC AGTTGGATGC GCTGTTAAAC 
GGCTACTCTG ATCATCTGAT TATTAATCCA TCCCCGGCCG ATTTTCAGCA GGCAATTGAA 
GATATTGATG ATTTCATACA ACGCGTGTTG TGA
 
Protein sequence
MKETTKALKD KILDGAIELF IEKGIEKVTT RELAEHVGIS RSHIYHYFPD WQTLSIEALT 
AFMLADLADV AADIATLPPK EKLHELVKNY LPDTTDVIWN LYGSLWQLAV HNTAYAELAH 
VMTGKWSALL EEIIASGVAS GAFKNADIQR VSRQLDALLN GYSDHLIINP SPADFQQAIE 
DIDDFIQRVL