| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0822 |
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| Symbol | |
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| ID | 8131747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 961206 |
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| End bp | 961775 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644864104 |
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| Product | Fimbrial protein |
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| Protein accession | YP_003016410 |
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| Protein GI | 253687220 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAA ATAACACTAT GGTCGTGAAA AGCAGGTCGC GCAGCACTCT GCTCGCTTTT
ACGTTTGGCA TTATGGTGCT GCATTCCAGC GCCGCTTTCA CACAGCAGAT GACATCGCTC
GACGAACATG AAATGACCTT CCACGTTTTA GTCGTCAACG CCGCTTGTAA TGTGAGTACG
GAGAGCAAGG CGATTGTGGT GGACATGAGA GAAGTCTCCG AGCGCTATTT GAAAGCCAAT
AGCTATGGCG ACTGGCATGA CTTCACGATT AACCTCACAG ACTGCAATCT GGATACTTAC
CAAAACGTCA CTATTCGCTT TTCAGGAAAA GAAGAGCCGC TGTTGCCTAA GCGGTTGGCG
CTGGATACAC CTTCCGGTGC CAAAGGTATC GCGGTTGGCA TTTATCATGC GAACAAACTG
GTCAGTATCA ACAGCAGCAC GGACAGCATT GTGCTGCAAA GCGGAGACAA CGCCATTCCT
TTTTCGGCCC GCATCGAAAA GATACGCGAC GATCTGATCA AGTCCGGTGA TTTTATGGCA
ACGGCGAACT TCACCTTGAG CTATTTATAG
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| Protein sequence | MIKNNTMVVK SRSRSTLLAF TFGIMVLHSS AAFTQQMTSL DEHEMTFHVL VVNAACNVST
ESKAIVVDMR EVSERYLKAN SYGDWHDFTI NLTDCNLDTY QNVTIRFSGK EEPLLPKRLA
LDTPSGAKGI AVGIYHANKL VSINSSTDSI VLQSGDNAIP FSARIEKIRD DLIKSGDFMA
TANFTLSYL
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