| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0804 |
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| Symbol | |
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| ID | 8131729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 937895 |
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| End bp | 939268 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644864088 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003016394 |
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| Protein GI | 253687204 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.319544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGC ATAAGATAGC ATCTGGACAA AATAAGCCTG CAAGAAGTAC CTCTGACCTC
GTTAAAGCGG CAGTGTCCGG CTGGCTGGGC ACTGCATTGG AATTTATGGA TTTCCAGCTG
TATTCGCTCG GGGCGGCGCT GGTCTTCCAT GAAATCTTCT TCCCTGAACA ATCGGCGGCG
ATGGCGCTGA TTCTGGCAAT GGGCACCTAT GGTGCAGGCT ACGTGGCACG TATCGTCGGC
GCCTTTATTT TCGGCCGCAT GGGTGACTCC ATTGGTAGAA AGAAAGTGCT CTTTATTACT
ATTACGATGA TGGGGATCTG TACCACGTTA ATCGGGGTGC TGCCGACTTA CGCGCAGATC
GGTATCTTCG CGCCGATCTT GCTGGTGACC TTGCGTATCG TGCAGGGGTT AGGCGCCGGT
GCTGAAATTT CTGGTGCGGG TACGATGCTG GCGGAATATG CGCCGAAGGG GAAACGCGGA
ATTATTTCCT CACTGGTGGC GATGGGCACC AACTGCGGGA CGCTCAGCGC CACGGCTATC
TGGGCCTTTA TGTTCTTTGC GCTCTCCAGA GAAGAATTAC TGGCGTGGGG CTGGCGTGTA
CCGTTCCTGG CCAGCGTGGT CGTGATGATA TTCGCGATCT GGCTGCGTAT GAACCTGAAA
GAAAGCCCGG TCTTTGAGAA AGTCAGCAAT GACGTATCCG GTACTGAAGA GCCGTCCCCT
GCTCTGGTGG TTGAGCAAAG CGAGCAGAAA TCGATCCTGT CGATGTTCAA AAGCAAAGCA
TTTTGGCTGG CTACCGGGCT GCGTTTCGGC CAGGCGGGAA ATTCAGGGTT AATTCAGACT
TTCCTAGCGG GATATTTGGT TCAAACGTTG CTGTTTGAAA AATATATTCC TACTGACGCT
TTAATGATTA GCTCTATTAT CGGTTTTATT ACGATTCCAT TATTAGGATG GTTGTCGGAT
AAAGTAGGTC GTCGCATACC TTATATTATT CTGAATATCT CGGCGATATT GTTAGCCTAC
CCAATGCTCT CTCTTATTGT TGATAAAGAG AATAGCGTGA ATGTCATTAT CGTCAGCATC
ATCATTATTC ATAACTTCGC GGTACTGGGA TTATTCGCAC TGGAAAATAT TACCATGGCG
GAAATGTTCG GTGGACGCAG CCGCTTTACG CAAATGGCGA TTGCCAAAGA AACCGGTGGT
TTGGTTGCCG TTGGTTTCGG TCCCGTATTA GCGGGTATTT TCTGCAACAT GACCGGTTCC
TGGTGGCCGA TTGTCGTGAT GCTGATTGCT TACTCTGTGA TTGGTTTATT CGCGGCTATC
TGTATGCCTG AAGTTAAAGA TCGCGATTTA GATGCGTTAG ACGACGCAGC GTAA
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| Protein sequence | MNKHKIASGQ NKPARSTSDL VKAAVSGWLG TALEFMDFQL YSLGAALVFH EIFFPEQSAA
MALILAMGTY GAGYVARIVG AFIFGRMGDS IGRKKVLFIT ITMMGICTTL IGVLPTYAQI
GIFAPILLVT LRIVQGLGAG AEISGAGTML AEYAPKGKRG IISSLVAMGT NCGTLSATAI
WAFMFFALSR EELLAWGWRV PFLASVVVMI FAIWLRMNLK ESPVFEKVSN DVSGTEEPSP
ALVVEQSEQK SILSMFKSKA FWLATGLRFG QAGNSGLIQT FLAGYLVQTL LFEKYIPTDA
LMISSIIGFI TIPLLGWLSD KVGRRIPYII LNISAILLAY PMLSLIVDKE NSVNVIIVSI
IIIHNFAVLG LFALENITMA EMFGGRSRFT QMAIAKETGG LVAVGFGPVL AGIFCNMTGS
WWPIVVMLIA YSVIGLFAAI CMPEVKDRDL DALDDAA
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