| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0766 |
|---|
| Symbol | |
|---|
| ID | 8131691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 896847 |
|---|
| End bp | 897701 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644864050 |
|---|
| Product | sulfate/thiosulfate transporter subunit |
|---|
| Protein accession | YP_003016356 |
|---|
| Protein GI | 253687166 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0555] ABC-type sulfate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTGA GGTCGGGTAA CCTCTTCTCT GGTTCAGGTA AACGGGTGCT GCCGGGATTC
GCCTTGAGTC TGGGCAGCAG CCTGCTGTTT GTCTGCCTGA TTCTGCTGCT GCCGTTAAGT
GCGCTGGTGA TGCAGCTCTC CGAAATGAGT CTGGTGCAAT ATTGGACGGT GATTTCCAAT
CCGCAGGTGG TAGCCGCTTA CAAGGTGACG CTTCTGGCGG CGGGGCTGGC GACGGTATTT
AATGCAGGAT TTGGCCTGTT AATGGCGTGG ATTCTGACGC GCTATCGCTT TCCCGGTCGC
GCCTTGCTGG ATGGGCTAAT GGATTTACCC TTTGCGCTCC CCACGGCCGT AGCAGGGCTG
ACGCTGGCCG CTCTGTTTTC AACGACCGGC TGGTACGGCG CATGGCTGGC AGAATACGGT
ATCAAAGTAT CGTACACCTG GCTGGGGATT ACGGTCGCGA TGGCGTTCAC CAGCATTCCC
TTTGTTGTGC GGACCGTTCA GCCGGTGCTG GAAGAGTTGG GTCCGGAATA CGAAGAGGCG
GCGCAGACGC TGGGGGCGAA TCGCTGGCAG TGTTTTCGCT ATGTCATTTT ACCGGAATTA
ACCCCGGCGC TCTTAACGGG CACCGCGATG TCGTTTGCCC GCAGTCTGGG CGAATTTGGC
GCGGTCATCT TTATTGCAGG GAATATTGCC TGGCAGACGG AGGTCGTTTC GCTGATGATT
TTTATCCGCC TGCAGGAGTT TGATTTCCCT GCTGCCAGCG CGATTGCTTC CGTTGTGCTA
GCGGCTTCCT TATTGATCCT GTTTGCCGTC AATGTGCTGC AAAGCCGCTT TGGTCAACGG
ACACGGAGCG TGTAA
|
|---|
| Protein sequence | MSLRSGNLFS GSGKRVLPGF ALSLGSSLLF VCLILLLPLS ALVMQLSEMS LVQYWTVISN
PQVVAAYKVT LLAAGLATVF NAGFGLLMAW ILTRYRFPGR ALLDGLMDLP FALPTAVAGL
TLAALFSTTG WYGAWLAEYG IKVSYTWLGI TVAMAFTSIP FVVRTVQPVL EELGPEYEEA
AQTLGANRWQ CFRYVILPEL TPALLTGTAM SFARSLGEFG AVIFIAGNIA WQTEVVSLMI
FIRLQEFDFP AASAIASVVL AASLLILFAV NVLQSRFGQR TRSV
|
|---|
| |