| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0760 |
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| Symbol | |
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| ID | 8131685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 886262 |
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| End bp | 888865 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644864044 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003016350 |
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| Protein GI | 253687160 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGA ACGTCTATTT AATGATGCTA TTGTCATTAT TATCAGGGCC TGCACTCGCA
CAGCAAAACG ACAACTCTGT TGATGAAAAT CAGCAGAAAA ACAATGCAGA AACCGAAGAA
GAACAGCAGG GTGATTCCTC TTCAGGAAAC GGCGAAGATA CGATTTTAGT TCGCTCAACC
CCAACGAGTC AGTCCATGGG GACTCAGATT ATTAATGCTG AGCAGATTAA AAAAATGCCA
ACTGGCAACG GGTCGGTGCC GGAGTTATTA AAGAATAACC CCGCAGTGCA GTTCTCGAAT
ACGGCGAATA GCAGCAATAC GCTGGGTGAG TTGGCTCCAG AGAACGTCTC GTTCCACGGC
GAGAAGTTTT ACAATAATAA CTTTATGATC GATGGGTTAT CGAATAATAA CAATATCAAT
CCCGGAGCTA ATAAGGGAGT ATTGAGTGGA GATCCTGATG GTTATAACGC GACAGATTTA
CCTGCGGGGG GTACGCAATC GTTCTGGATT AACTCCGAGT TGATTGAATC ACTGGAAGTA
TTTGACAGTA ATATATCTGC TAAATACGGT GATTTTACCG GTGGTGTGGT AGATGCCAAA
CTCATGGATC CCAAGTTGGA TAAGGCATCT GGAAAAGTCT CTTACCGCAC CACAAGTGAC
AGTTGGACTA GCTATCACAT TGATTCTAAT ATCAGCGAGG AATTTTATTC TGCTACTAAC
CTCTACTACC AACCGAAATT TAAGAAACAG TTTTATTCGG CTACATTTAA TCAGCCATTG
AGTGATAAAG CGGGCTTTAT TTTTGCCTAT AACCGCCAGC AGTCAGATAT TCCATATTAT
CAGCAGTACC TGCAGACATG GAAAGATCAG GAACGGATTA GTGAAACTTA TCTTTTAAAG
GGTACTTATC TGACGGATAA CGGCGATATT GTTCGCATGA TGGGCATGTA TTCCCCTCAC
GAATCTAAAT ATTACAAAAG AGATGTTAAA AATGGGGCAT TTACCAATAC GGGTGGGGGC
TACCGCTTCA ATATGGAGTG GGAGCACAAT GCCAATTGGG GGAAAATGAC CAGTCTTGCT
GGGTACCAGT ACGAGCAGAA TAAAATTGAA CATGAGGCGA GCTATTTTGC TACTTGGCAG
CGTTATAATA CATCTTCTAA CTTTATTTCC GAGCAAATAG ATTGGATTAG TTCCTCTCCT
GCCCGTACCT ATCAAAATTC ATTGATAGGA GGATACGGAA AGTTTGCAAC AGAAAAAAGC
ACAATTACAT TAAAGCAGAA CTATGAGCTT AACCCTTTAG CAATTTGGGG AACCCAGCAT
CAGTTAGATT TAGGCTGGCA AGTTGATTCT TATAATACAA GATACCGCCG CTTTAGCGAT
GTTAGCTCAA GCCGTGCTAC ACCAACGATA GATAAGAATG TAGTGTGTCA GTCTGGGGAT
GATTATTGCA TTGACGGGGA ACAATATTTC AAAAGTCGGA CTCTATATCC AGAGCGTACC
GTTGAGGGAA GCTATGCCAA TTACGCTCTT TACCTTCAGG ATAGTATTTC TTTGGGGCGT
GTAGAAGTGA CCCCCGGAGT GCGTGCTAGT TATGATGATT TCCTGGGAAA TTTAAATTTC
GCTCCCCGTT TTTCTGCTTC TTATGATGTT TTTGGCGATC GGTCAACACG TCTGTTTGGT
GGGGCGAATC GCTATTATGG CGCGAATATG CTGTCATATA AGCTGCGTCA GGGAATTAAC
ACGAATATTA TTCAAAACCG TACGTCAGCC AGCGATCCAT GGATTTCCAA CCCTGCAAGA
ATTGCGGGTC TTGATTATGA TATTTCTAAT TTAAACACGC CTTATAGTGA CGAGATAACA
CTGGGATTAT CACAGCGCGT TATGAATACT GTGTGGACCG CCAAATGGGT TAATCGCAAG
GGGAAAGATC AGTTTGGTGC TGAATCAATG ACCGTTGCTG GGCAACGCTA CCGCGTGATG
AATAATGCTG GCCGGACAGA AGGGAATACA TTGTCTCTGG AAGTCGAACC TATCAGTCCG
CACCGCTTCA GTTTTGCTGA AGTGAATTGG AAATTTGGAG CTGGTATCGC AGAAAATAAA
GCTAACTCAA TTGCTTATTA CGATGATGTG AATTCAGATG AGAGTCGGGT GATTGTTGAC
AATAAGTTAA TGTATAAAGG CGATATGGAT GCCATGGACT TCAATACGCC CTGGACTGCC
TTCCTGAATG TAGATACTTA CTTCCCAGCG ATTCGTCTCA ACTGGGGGCA ACGCGTCGGC
TATACCTCTG GTTACAAAGG GTATACTACC TTATCATCGG CGACGGTGTG TCCTGGCGGG
AGCTCAGCGT GCGGCGCGGA TCCTAGCTTT ACAGGAAGCG CTATAGAGTA TATCTCAACT
CAATACGATG ACTTTATCTC CTACGACTGG CGTTTCTCCT ATTCACAACC GGTATACAAA
ACCCAGACGC TGGATATCAC CCTTGATGTG TTGAACGTTT TAGATAACGT AGTAGAAACT
CAGCAGAAGG TGAGTTCTAC TAACAGCACT GTTACCTATA AACCCGGCCG TCAGTTCTGG
CTTGGTGTTG CTTACACCTG GTAA
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| Protein sequence | MNKNVYLMML LSLLSGPALA QQNDNSVDEN QQKNNAETEE EQQGDSSSGN GEDTILVRST
PTSQSMGTQI INAEQIKKMP TGNGSVPELL KNNPAVQFSN TANSSNTLGE LAPENVSFHG
EKFYNNNFMI DGLSNNNNIN PGANKGVLSG DPDGYNATDL PAGGTQSFWI NSELIESLEV
FDSNISAKYG DFTGGVVDAK LMDPKLDKAS GKVSYRTTSD SWTSYHIDSN ISEEFYSATN
LYYQPKFKKQ FYSATFNQPL SDKAGFIFAY NRQQSDIPYY QQYLQTWKDQ ERISETYLLK
GTYLTDNGDI VRMMGMYSPH ESKYYKRDVK NGAFTNTGGG YRFNMEWEHN ANWGKMTSLA
GYQYEQNKIE HEASYFATWQ RYNTSSNFIS EQIDWISSSP ARTYQNSLIG GYGKFATEKS
TITLKQNYEL NPLAIWGTQH QLDLGWQVDS YNTRYRRFSD VSSSRATPTI DKNVVCQSGD
DYCIDGEQYF KSRTLYPERT VEGSYANYAL YLQDSISLGR VEVTPGVRAS YDDFLGNLNF
APRFSASYDV FGDRSTRLFG GANRYYGANM LSYKLRQGIN TNIIQNRTSA SDPWISNPAR
IAGLDYDISN LNTPYSDEIT LGLSQRVMNT VWTAKWVNRK GKDQFGAESM TVAGQRYRVM
NNAGRTEGNT LSLEVEPISP HRFSFAEVNW KFGAGIAENK ANSIAYYDDV NSDESRVIVD
NKLMYKGDMD AMDFNTPWTA FLNVDTYFPA IRLNWGQRVG YTSGYKGYTT LSSATVCPGG
SSACGADPSF TGSAIEYIST QYDDFISYDW RFSYSQPVYK TQTLDITLDV LNVLDNVVET
QQKVSSTNST VTYKPGRQFW LGVAYTW
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