| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0701 |
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| Symbol | |
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| ID | 8131625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 826853 |
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| End bp | 828289 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863986 |
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| Product | sugar (Glycoside-Pentoside-Hexuronide) transporter |
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| Protein accession | YP_003016292 |
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| Protein GI | 253687102 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.657348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACA ATAATAAGCT GAGCGTTGCG GAGAAAATCG GCTTTGGCAT GGGCGATGCC
GCCTGTGGCA TCGTCTATTC TTCCGTAACC ATGTTTCTTA CCTACTTTTA TACGGATATC
TATGGCATCT CCGCCGCTGC GGTAGGGGTT ATGTTTCTGG TGACGCGCGT GCTGGACGCC
ATCGTTGATC CTCTGATTGG CATCATTGCC GACCGCACCA AAACCCGCTG GGGGCATTTC
CGCCCGTGGC TGGTCTGGTT TGCCGTCCCC TACGCCGTGA TTGCCGTACT GGCCTACACC
ACGCCGGAAC TGAACGGTAC GGGTAAACTG GTTTACGCCT ACATCACCTA CACGCTGCTG
ATGCTGTTCT ATACGTTTAT CAACATCCCT TACTGTTCGC TCGGCGGTGT CATCACCAGC
GATGAAAAGG ACAGGATTTC CGCGCAGTCT TACCGCTTTA CCATCTCCTC AATGGCTGGG
CTACTCGTAT CGGTCGGCAC GCTGTGGCTG GTCGACTGGA TTGGCGGTAC CAATAAGCAA
TTGGGCTATC AGGGCACGAT GATGATCATG GGCTGTCTGG CCGTCGTGAT GCTGTTTTTT
TGCTTTTTCA CCACTCAGGA ACGCATCAAT CCTGCGGTGG ATAAAAATCA GAACGTCTGG
GACGATGTCA GAAACCTGCT GAGCAACGAT CAGTGGCGCA TCGTGGCTAT CATTACGTTC
TTTTCCAGCA TGGCGGGTGT CATGCGCGGT GCGGCGACGC TGTATTACGC AACCTACCTG
ATGGTCGGGC CAGAGCAAGG CAGCGCCGCC GGAACGGCAA TGAAATCCGC CTTTATTACC
ACCAGCGTCG TCGGCACTAT TATTGGTGCA ATGATGGCGG GCTACTTTGG CAAGCGATTC
AGCAGCATAA GCCTGTTCAA GAACATTAAC CTGCTGCTGG TGTTTGTCGG GGTCATCCTG
TTTATGGTGC CGCCACAGTG GCTGGCGGTC GTCTTCCCGC TCTATTTTTT GATCGGCTTC
TTCCACCAAA TGTATCAACC GTTCAAATGG AACATGATGG CGAATGCCGC CGATTACGGC
GAATGGAAAA CAGGCCGTCG CATTACTGGT CTGTCATTCT CCGGCAACCT ATTCGCACTG
AAACTGGGTA TGGCGGTTGC AGGTGCACTG GTCGGCTTTT CACTCGGCTG GTTTGGCTAT
GTTGCAGGTT CCCCCACACA AACACCGCTC GCCACTGCCG GTATTATCGG CTTGCTGAGC
ATCGGGCCAT CACTCTCCTA TCTGGTTCTG TATTGGCTGG TACGTTTTTA CAAGCTGGAC
GATAAGACGA TGGAAAACAT TCAGGCTGAT TTGGCAAAAC GTCACAGCAC ATCTGACCGC
GTGCCGGAAA GCGAGCTTCC TGTCGATCAA GGCCTGACGC CAAAAGGTGC AGCCTGA
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| Protein sequence | MTNNNKLSVA EKIGFGMGDA ACGIVYSSVT MFLTYFYTDI YGISAAAVGV MFLVTRVLDA
IVDPLIGIIA DRTKTRWGHF RPWLVWFAVP YAVIAVLAYT TPELNGTGKL VYAYITYTLL
MLFYTFINIP YCSLGGVITS DEKDRISAQS YRFTISSMAG LLVSVGTLWL VDWIGGTNKQ
LGYQGTMMIM GCLAVVMLFF CFFTTQERIN PAVDKNQNVW DDVRNLLSND QWRIVAIITF
FSSMAGVMRG AATLYYATYL MVGPEQGSAA GTAMKSAFIT TSVVGTIIGA MMAGYFGKRF
SSISLFKNIN LLLVFVGVIL FMVPPQWLAV VFPLYFLIGF FHQMYQPFKW NMMANAADYG
EWKTGRRITG LSFSGNLFAL KLGMAVAGAL VGFSLGWFGY VAGSPTQTPL ATAGIIGLLS
IGPSLSYLVL YWLVRFYKLD DKTMENIQAD LAKRHSTSDR VPESELPVDQ GLTPKGAA
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