| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0671 |
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| Symbol | |
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| ID | 8131595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 776964 |
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| End bp | 777944 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644863956 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003016262 |
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| Protein GI | 253687072 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.732749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACG CACGTCTGAA CCTGATTACG CTGCTGGTGT TTTGCAGCGT GCTGATGCTG
CTTCTGGCGG TCAACGCCTG GAGAAAATCA CGGCAGCAGC GCATGCAGCG CGAACAACGC
TGGCAGCAGA TTTTGAACGA GGTCAGCCCG TCGGCTGCCG TAGTGGCATC TGATTCGATC
CTGCGTGATG AGATCAGAAC GCCGCTGATG GGTGTCCCGG TGATTGGACG TTGGCTGGCG
ATCCTGTGGG CGCAGATGAC GTTCATTGGC TGGAAAAAGA ACCTGCTTCA ACGCTCTCTT
GCGCTGGCGG CGGTTAGCCT GATACTCGGC ATGATTCTGG GGCAGCGCAC CCTGCTGCCG
CTCACGATGG GGCTGATTTT TACGCTGGTG CTGTTTGTCA GTATCGGCAT GCTGCTGTTC
CGTTCGACGT TGCAAAAACA TCTGAAAGCG CTGCGTGAGA GCCTGCCGGA AGCGATTGAT
GCGATAACCC GCAGCTGCCG TGCCGGTGTC CCGGTTGCTA ACACTTTCTC TATTGTCGCT
GAGCACCTGA CCGGGCCGCT GGCGAATGAA TTCAAGACGA TCGATCACTG GTTGCGGCTG
GGGATTCCGC TGCGTCAGGT GATTCAGGCT TCTGCCACGC GGGTGCCAAT GTCCGAATAC
CGTTTCTTCG TGGTAATTCT GATCATCAAC CAGGAAGCGG GTGGACGACT GGGGGAAACG
CTGGAGCGTC TGTCGGCCAC GCTGCGTGAA CGTCGCGAGT TGCAGTTGAA AGTGCAATCC
AAAACGTCGG AAGCGCGGGC ATCGGCCAAG ATTGTCGCGG CACTGTTCCC CGGCTGTCTG
GCCTATTTGT ACATGAAGTC GCCGGACGAT TTCAGTTTCT TGTTTTCCGA TCCGGTGGGA
ACGTCGGTGC TGATTTATGC CTTGTGCAGC GTCTCAGTCG GCATGTTGAT CACGCACGTG
ATGGTTAAGC GAATTGGGTA A
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| Protein sequence | MSDARLNLIT LLVFCSVLML LLAVNAWRKS RQQRMQREQR WQQILNEVSP SAAVVASDSI
LRDEIRTPLM GVPVIGRWLA ILWAQMTFIG WKKNLLQRSL ALAAVSLILG MILGQRTLLP
LTMGLIFTLV LFVSIGMLLF RSTLQKHLKA LRESLPEAID AITRSCRAGV PVANTFSIVA
EHLTGPLANE FKTIDHWLRL GIPLRQVIQA SATRVPMSEY RFFVVILIIN QEAGGRLGET
LERLSATLRE RRELQLKVQS KTSEARASAK IVAALFPGCL AYLYMKSPDD FSFLFSDPVG
TSVLIYALCS VSVGMLITHV MVKRIG
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