| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0666 |
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| Symbol | |
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| ID | 8131590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 771098 |
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| End bp | 772042 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863951 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_003016257 |
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| Protein GI | 253687067 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.406757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGA ACTCTACATA CGTACTGTCA GGCGCGTTCG TGCTGGCAGG CATTGTTGCG
CTGGTGGTGC GTAGCCATCT CTCTTCTGAA CCCCCTGCGC CGCCTCCGGT AGTGGCTAAA
GCGCCGGAAA AAATCGCTGT CTTGGTGGCA GCAAAAGATC TGCATCCCGG TGATTTCATT
GATTCTAGCT CAGTACGCTG GCAAACCACG GATGAATCAG TTTCCCGTTC GTTTAACTTC
GTTCGCGGCC GGGATAGCCA GTTTCTGCTA TTTGGCGCAA CCCTGCGTGA AACGGTAAAG
GAGGGGACAC AGCTTAGCAG TAATGTTGTT GTGAAGCCCA ATGAACCGGG CTTTGTTGCC
GCCGTGCTGC ATAAAGGGAT GCGGGCTATC TCCGTTCCTA CCAGCGCGAT TGCGAGCAAT
GCTGGGCTAG TCTCAGCAGG CGATCGTGTT GATGTGATCC TCAGCATGAG ACGAGACGAT
CAGTCAGAGT TACCCGTTAG CCGTAACCAG CCAGTTGTGA TGCCACTTTT GGCTTCGCAG
ACCATTGTTC GCGATCTGAG AGTGCTGGCA CTGAATGATA AGGTCGGTAC GCCGGTATAT
CCACGTTTGG ATGCGATGGA AGATGGCGCG GCGCTTGATG CCGCAGCCAA GAGTCGTGAG
TCAGCCGTGC GTTCTCGTCC TGCTACCTAT CAAACCGTCA CGTTGGAAGT CACGCCGCAG
CAGGCTGAGG CACTGACCGT CGCTAAAGAA CTGGGAATTC TGCATTTATC GCTGCGCAGT
GCCACTCAGG ATGATGTTGT CGATCCGCTG AAGGAACGAC AGAGCGTGAC TACGGTTCCA
CTAGCAACCG ATATCTACGG GGCGCTATCA GCAGGATCCG GCGGACACAA AGTGAAGGTC
TATCGCGGTG AGCAAAAAGA CGTGGTGACG TTCCCCTCCC GATAG
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| Protein sequence | MKVNSTYVLS GAFVLAGIVA LVVRSHLSSE PPAPPPVVAK APEKIAVLVA AKDLHPGDFI
DSSSVRWQTT DESVSRSFNF VRGRDSQFLL FGATLRETVK EGTQLSSNVV VKPNEPGFVA
AVLHKGMRAI SVPTSAIASN AGLVSAGDRV DVILSMRRDD QSELPVSRNQ PVVMPLLASQ
TIVRDLRVLA LNDKVGTPVY PRLDAMEDGA ALDAAAKSRE SAVRSRPATY QTVTLEVTPQ
QAEALTVAKE LGILHLSLRS ATQDDVVDPL KERQSVTTVP LATDIYGALS AGSGGHKVKV
YRGEQKDVVT FPSR
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