Gene PC1_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0652 
Symbol 
ID8131576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp755866 
End bp756204 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content44% 
IMG OID644863937 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003016243 
Protein GI253687053 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCGA AGGATAACGC AGAGCACTAC GTCTGGGGCG ATAGCTGTGA TGGATGGTAT 
CTCGTCAAAA GACAGGATAT GAGTATCATT CATGAAAGGA TGCCATCAGG AGCTAAGGAA
AAACGTCATT ATCACTCAGA ATCAAGACAG TTCTTCTTTG TGCTTGCTGG TACCCTAACG
ATTGAATTAG AAGGAGAAGC ACACATAATC ACTGAACATC AAGGTCTTGA GATTCCTCCC
AGTGCAAAAC ATCAGGCCAA AAATGAATCA GATGATGATG TTGATTTCAT TGTCGTCTCA
CACCCAACGG CTCGGGGAGA CCGTATCGAC CTTCTATAG
 
Protein sequence
MISKDNAEHY VWGDSCDGWY LVKRQDMSII HERMPSGAKE KRHYHSESRQ FFFVLAGTLT 
IELEGEAHII TEHQGLEIPP SAKHQAKNES DDDVDFIVVS HPTARGDRID LL