Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0652 |
Symbol | |
ID | 8131576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 755866 |
End bp | 756204 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644863937 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_003016243 |
Protein GI | 253687053 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTTCGA AGGATAACGC AGAGCACTAC GTCTGGGGCG ATAGCTGTGA TGGATGGTAT CTCGTCAAAA GACAGGATAT GAGTATCATT CATGAAAGGA TGCCATCAGG AGCTAAGGAA AAACGTCATT ATCACTCAGA ATCAAGACAG TTCTTCTTTG TGCTTGCTGG TACCCTAACG ATTGAATTAG AAGGAGAAGC ACACATAATC ACTGAACATC AAGGTCTTGA GATTCCTCCC AGTGCAAAAC ATCAGGCCAA AAATGAATCA GATGATGATG TTGATTTCAT TGTCGTCTCA CACCCAACGG CTCGGGGAGA CCGTATCGAC CTTCTATAG
|
Protein sequence | MISKDNAEHY VWGDSCDGWY LVKRQDMSII HERMPSGAKE KRHYHSESRQ FFFVLAGTLT IELEGEAHII TEHQGLEIPP SAKHQAKNES DDDVDFIVVS HPTARGDRID LL
|
| |