| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0633 |
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| Symbol | |
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| ID | 8131556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 736017 |
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| End bp | 738161 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644863917 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003016224 |
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| Protein GI | 253687034 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGTG ATCTTGTTCA ATTAACCAGC GCGCAGTGCG ATGTCATCGT ACGCTGCGCC
CCGGCGGCGG AAATTCTCTA CTGGGGGCCA CGGTTACGTG GTTTTTCGCC AGAGGATATT
GTTTCTCTGC AACGTCCCGT GGCGAATGGT CGTCTGGATG TGGATCTTCC TCTGACGCTG
GCGATGGAAT ACGGACGTGG TCAGTTCGGT TCACCGGGGA TTGAAGGGCA CCGCTCAGGT
TATGACGCCG CGCCGATCTT CACGACCACG CAGGCTGACG TTCAGGGCAA TACGCTAACC
ATCACGGCAG AAGATACCCT GGCAGGGCTG CGCCTCACCA GCGAACTGCG TCTGGATCCA
CAGACCGATG TGCTGCAACT GCGCCACACG CTACAGAATC TGCGTGCTGA TGTCTGGCAA
GTACAGCGCC TGGCCGTCAC GCTCCCCGTC CCGGAACGGG CGAGCGACGT CATGGCGTTT
CACGGCCGCT GGCTACGTGA GTTTCAGACT CACCGCCTCA CGTTGCAGCA CGGCGGCTTT
ATTCAGGAAA GCCGTCGGGG AAGAAGCTCC CACGAATATT TCCCCGCGTT TATCCTCGGT
GAATCCGCGT TCAACGAGCA ACATGGCTCA GTATGGGGCG TGCATTTAGG CTGGAGCGGC
AACCACCGCC TGCGTGCCGA TATCAAAACG GACGGACGCC GCGTTGTGCA GGCGGAAGCC
CTGTATCTGC CGGGCGAAAT CACGCTGACG CAGTCGGAGT CTCTCACTAC GCCGTGGGTC
TACGCAGCTT TCTCAGATAG CGGCTTGAAC GGCATGAGCC AGCGCTATCA CGCCTTCCTG
CGTCAGTCCC TCATCCAATT CTGCGGTGAT AAGCCACGTC CGGTGCACCT CAATACGTGG
GAAGGGATCT ATTTCGATCA CGACCCTGAA TACATCATGC AGATGGCGAG CAAGGCCGCT
GACGTCGGCG TGGAGCGCTT TATTATTGAT GACGGCTGGT TCCGTGGGCG TCATCACGAC
CGAGCCGCGC TCGGCGACTG GTATCTCGAC GAGGAAAAAT ACCCGAACGG GCTGATGCCA
GTCATCGATC ATGTCAAAGC ACTGGGGATG GAGTTCGGCA TTTGGGTCGA ACCGGAGATG
ATCAACCCCG ATTCCGACCT GTTCCGCGCC CATCCCGACT GGGTGCTGCA ATTGCCCGGC
TACGCACAGC CTACGGGACG CTATCAGTAC GTGCTGAATT TAAATCAGCC CGATGCCTTC
ACTTACCTGC TGGAGCGGCT GAGCTGGCTG CTGGGCGAAC ATCCTGTCGA TTATGTGAAA
TGGGATATGA ACCGTGAGCT GGTGCAGCCC GGTCATGAGG GGCGGCTGGC CGCCGATGCG
CAAACCCGAC AGTTCTATCG CCTGCTCGAT ACCCTGCGTC AGCGCTTTCC TCATGTTGAG
TTTGAATCCT GCGCGTCCGG CGGTGGTCGT ATCGACTACG GCGTGCTGGA ACGCACCCAG
CGGTTCTGGG TGTCGGATAA CAACGACGCG CTGGAACGCC AGACCATCCA ACGCGGCATG
AGTTACTTCT TTCCGCCCGA GGTGATGGGG CAACACATCG GGCATGCACG GTGCCATGCC
ACATATCGAC GTCACACTAT CGCCTTTCGC GGCCTGACCG CCCTGTTCGG CCATATGGGC
ATCGAGCTGG ATCCTGTAAA GGCCGATGAC GACGAGCTGG AAGGCTATCG TCACTACATC
CAGTTGCATA AAACCCTGCG TCCGCTGCTG CACAGCGGCA CCACCTGGCG GGTCGACATG
GCGGACGATA CGGTGCAGGC CACTGGCGTG GTAAGCCACG ATCGGCAGCA CGCTGTTTTT
CAGGTAGCGC AGTTGCGTAT GCCGGATTAT TCACTGGCGG GCACGCTTCG CTTCCCCGGC
CTACAGCCCG ACGTTCGCTA TGAAGTCACA CTGCTGGATG GCCCGGAAAT CAAAACGGTG
CGCGAAGGCG GCGGCACTAT GCGCGAGCTC CCGCCCTGGT TACGTCAGCC AATCGTGATT
TCGGGAGATT GGCTAATGCA GGCCGGACTT GCCCTCCCCG TTCTGACGCC GGAGACCGCC
ATTCTGATCG GGCTTTCCGC GGTGACGGAT ACCGCTGGCA GCTAG
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| Protein sequence | MMRDLVQLTS AQCDVIVRCA PAAEILYWGP RLRGFSPEDI VSLQRPVANG RLDVDLPLTL
AMEYGRGQFG SPGIEGHRSG YDAAPIFTTT QADVQGNTLT ITAEDTLAGL RLTSELRLDP
QTDVLQLRHT LQNLRADVWQ VQRLAVTLPV PERASDVMAF HGRWLREFQT HRLTLQHGGF
IQESRRGRSS HEYFPAFILG ESAFNEQHGS VWGVHLGWSG NHRLRADIKT DGRRVVQAEA
LYLPGEITLT QSESLTTPWV YAAFSDSGLN GMSQRYHAFL RQSLIQFCGD KPRPVHLNTW
EGIYFDHDPE YIMQMASKAA DVGVERFIID DGWFRGRHHD RAALGDWYLD EEKYPNGLMP
VIDHVKALGM EFGIWVEPEM INPDSDLFRA HPDWVLQLPG YAQPTGRYQY VLNLNQPDAF
TYLLERLSWL LGEHPVDYVK WDMNRELVQP GHEGRLAADA QTRQFYRLLD TLRQRFPHVE
FESCASGGGR IDYGVLERTQ RFWVSDNNDA LERQTIQRGM SYFFPPEVMG QHIGHARCHA
TYRRHTIAFR GLTALFGHMG IELDPVKADD DELEGYRHYI QLHKTLRPLL HSGTTWRVDM
ADDTVQATGV VSHDRQHAVF QVAQLRMPDY SLAGTLRFPG LQPDVRYEVT LLDGPEIKTV
REGGGTMREL PPWLRQPIVI SGDWLMQAGL ALPVLTPETA ILIGLSAVTD TAGS
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