Gene PC1_0595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0595 
Symbol 
ID8131515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp694963 
End bp695487 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content54% 
IMG OID644863876 
ProductSterol-binding domain protein 
Protein accessionYP_003016186 
Protein GI253686996 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGGAAA AACTACGAGC GCAGATTGTG CGTCAGGGGC CGAGCTTATT AGGTAAGCCA 
CTCAAGTTCA CCCCCTTTGC GCTACAGCGT CAGGTTTTGG AACAGATGTT GGGCTGGCAG
TTCCGTCAGG CGCTGGAGGA GGGCGATCTG GCATTTCTCG AAAGCCGCTG GCTGAAAATT
GAGGTACGTG ACGTCGGTTT GCAGTGGTTT ATGACGCTGC GTGATGGCCG TCTGGTGGTG
AGCCATGATG AGACGCCGGA TGTCAGCTTT AGTGCGGACG CGAACGATCT GATTTTGATC
GCCGCGCGTA AAGAAGATCC CGATACGCTC TTTTTCCAGC GTCGTCTGCG CATTGAAGGC
GATACTGAGT TAGGTTTGTA TGTGAAGAAC CTGATGGACG CCATTGAGCT TGAAGCCATG
CCTGCGCCGC TGCGTATCGG CCTGCTGCAA TTGGCGAATT TTGTTGAAGC CGGTTTACAG
GAGGGCGTGG TGCAAACAGC AAATCACGCG CCAGTATCAT GCTAG
 
Protein sequence
MLEKLRAQIV RQGPSLLGKP LKFTPFALQR QVLEQMLGWQ FRQALEEGDL AFLESRWLKI 
EVRDVGLQWF MTLRDGRLVV SHDETPDVSF SADANDLILI AARKEDPDTL FFQRRLRIEG
DTELGLYVKN LMDAIELEAM PAPLRIGLLQ LANFVEAGLQ EGVVQTANHA PVSC