| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0580 |
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| Symbol | |
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| ID | 8131499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 676718 |
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| End bp | 677179 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644863860 |
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| Product | Lysozyme |
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| Protein accession | YP_003016171 |
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| Protein GI | 253686981 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAACA TTCCTGAAAC GATCAATGAA GCAGGACTCT CGCTGATTAA GAGTTTTGAA
GGTCTGAAAT TAACAAAGTA TCGTGACACA GCAGGTAAAT GGACGATTGG ATATGGACAT
TTAATACTGC CGAATGAAAA CTTTGATAAT GGAATTACCC CCCAGGAAGC TGATTTATTG
TTACGACAGG ACTTAAAAAC GGCGGAAAAT GGTGTTCAGC ATTATGTGAA CGTTGACCTC
AACGGAAATC AATTTGGTGC ATTAACATCA TTTACCTACA ACCTGGGAGT CAATAGTCTG
AAGACGTCGA CATTATTGCG CCTGCTTAAC CAAGGTGACT ATGTTGGCGC AGCAGCTCAA
TTTCCACGCT GGGACAAAGA TGGTGAGCAA GTCGTGGAAG GACTCCTTCG CCGTAGAGAA
GCAGAGAAAG CCCTTTTCCT ACAATCCATC ACACCAAATT AA
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| Protein sequence | MANIPETINE AGLSLIKSFE GLKLTKYRDT AGKWTIGYGH LILPNENFDN GITPQEADLL
LRQDLKTAEN GVQHYVNVDL NGNQFGALTS FTYNLGVNSL KTSTLLRLLN QGDYVGAAAQ
FPRWDKDGEQ VVEGLLRRRE AEKALFLQSI TPN
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