Gene PC1_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0547 
Symbol 
ID8131465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp635766 
End bp636269 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content55% 
IMG OID644863826 
ProductG/U mismatch-specific DNA glycosylase 
Protein accessionYP_003016138 
Protein GI253686948 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID[TIGR00584] mismatch-specific thymine-DNA glycosylate (mug) 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0527787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCG ATATTCTGGC CATGAATCTT CAAGTAGTTT TCTGCGGCAT TAACCCTGGG 
CTGTCGACGG CCCATCACGG TTACCACTTC GCGAACCCCA GTAATCGCTT CTGGAAAGTG 
ATTCATCATG TAGGTTTTAC CGAACGTTTG CTAACACCCG CGGAAGAACA GCATCTGCTG 
GATACCGGAT GCGGTATCAC CATGCTGGTG GAGCGCCCAA CGGTTGAAGC TACCGAACTG 
GGGCGAGACG AGCTGCTGCA AGGCGGCAAT GCGATTGTTG AGAAGATGGA ACGCTATCAA 
CCGCGTGCGC TGGCCGTGCT GGGGAAGCAG GCGTTCAGTC AGGCGTTTGG TATCAAAAAG 
GTCTCATGGG GGCGTCAGTC GCTGAATATT GGCGAAACAC AGGTGTGGGT GCTGCCGAAC 
CCAAGCGGGT TGAATCGTGC GACGCTGGAG TCGCTGGTGG CGTCCTATCA GGAACTGCAT 
CAGGCGTTGC AGGATAAGGC GTAA
 
Protein sequence
MITDILAMNL QVVFCGINPG LSTAHHGYHF ANPSNRFWKV IHHVGFTERL LTPAEEQHLL 
DTGCGITMLV ERPTVEATEL GRDELLQGGN AIVEKMERYQ PRALAVLGKQ AFSQAFGIKK 
VSWGRQSLNI GETQVWVLPN PSGLNRATLE SLVASYQELH QALQDKA