| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0492 |
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| Symbol | |
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| ID | 8131408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 576898 |
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| End bp | 577800 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644863769 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003016083 |
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| Protein GI | 253686893 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTGT TAGGGCTGAT TAGCAATTTT ATCCGCGTGG TGGAGAACGG CAGTATCGCC
GCGGCGGCAC GAGCTAAAGG TATGAGTCCG GCGGCGGTAA GCCAGAGCCT TTCACGGCTT
GAGACACATT TGGGCGTGCG CCTGCTATCG CGCACTACTC GTAGTATGAC ATTAACCGAA
AACGGTAAAC GTTATTTCGA GAAAGTACGC CATATTCCAC ATGACATTGA GCTCGCCTCG
CAGGCTGCGG CGAGTGAGAC CAAACTGCAA GGTCCGCTTT GCATCGCGAC GACTGCCGCG
TTTGGTCGGT ACGTTATCGC TCCACTGATG CCTGCTTTCA AAGAATCTTT CCCCGATATT
GATATCGAAC TGATTAGTAC CGACCGCAAC GTCAACCATC GGTTGGAAGG CGTTGACGTC
AGTATCCGCA TCGAGGCACA GCTAAACGAT CAGCTGATTG CCAGAAAAAT CGCATCGCTA
CCATTTATCT TCTGCGCGGC CCAGGCTTAT CTGGATCGCG CGGGTACCCC TCAGACTCCC
GAAGAACTCA GCCAGCACGC CTGTCTGGTT TTCCGCTATC CCACAGATGG ACGTTTTCTT
CCCTGGACTT TTATGGTCAA TGGGCAACCT GTTAACGTGA AGCTCAACCC CAAATTCATC
AGTGATGATA TTGATATTAT TGCAAAAATA GCAGCAAACG GAGGCGGCGT TACCCGTCTG
GCAAGCTTTG TTGCCCAGCC GTTGATAGAC AGTGGCCAAC TCACGCCTTT GTTCTGCTCA
GACCGCAGTA GCGGTAACCA CGTAGAGTCT TTACCGATGA ATATTTATGC CTGTGTCAAT
GAACGTTCGG CACTGAATTC AAAGGTAAGG GCATTTATTG CGTTTTTAGA AGCTGAGATT
TAA
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| Protein sequence | MDVLGLISNF IRVVENGSIA AAARAKGMSP AAVSQSLSRL ETHLGVRLLS RTTRSMTLTE
NGKRYFEKVR HIPHDIELAS QAAASETKLQ GPLCIATTAA FGRYVIAPLM PAFKESFPDI
DIELISTDRN VNHRLEGVDV SIRIEAQLND QLIARKIASL PFIFCAAQAY LDRAGTPQTP
EELSQHACLV FRYPTDGRFL PWTFMVNGQP VNVKLNPKFI SDDIDIIAKI AANGGGVTRL
ASFVAQPLID SGQLTPLFCS DRSSGNHVES LPMNIYACVN ERSALNSKVR AFIAFLEAEI
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