| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0472 |
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| Symbol | |
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| ID | 8131388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 554719 |
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| End bp | 556827 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863750 |
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| Product | peptidase M50 |
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| Protein accession | YP_003016064 |
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| Protein GI | 253686874 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCGC ATCTGCCACC CCTGCGTGCC GATCTGCAAT TGGTAGAATC GGCTCCTGGC
ATCAACGGAG CCCCGCAGTG GGTGCTGTCC GATCCGATAA CCGGACGTTA TTTTACCCTA
ACCCCCTCAG CTATCCGCCT GTTGCGTCAT TGGCCATTGC GCCAGCCGCA ACAAATATTG
GCCGCCGCCA ACAGCGAGCC CGGCCTGCCG CTGAGAGTGA AAGAGTTGGA GCAACTACTG
CAGTTCCTGC GCCAGCACGA TTTAATCGCG GCAAGTGATG TGGAGCAACG TCAGCGCTAT
CTGGGCAAAG CTCAGGCGAT GCGCACCAGC TTATGGAAAA GCGTGCTGCA CCAGTATCTG
TTTTTCCGTA TTCCTTTGTG GCGACCCGAT CCGGTACTTA ACCGCTGTTG GCCGTGGCTA
CAGCACTATG GCGCGCCCTT TCTGATGTGG GTATTTCCAT GCATCCTGCT GCTGGGTTTA
TTTTTGGTCA GCCGAGACTG GGTACGTTAC ACCCATTCGT TTCCACACCT CTTCAGTCTG
TCCGGCATGG CCGTGTTCGG TATTTCTCTG GTGTTCGCCA AATTTATCCA TGAGCTAGGC
CATGCCTTCA TGGCGAAACG GGCGGGTTGC CGTGTGCAAA GCATGGGCGT TGCCTTTATC
GTGTTATTTC CCTTGTTTTA TACTGATACT ACCGATGCTT GGAAACTGAA GGATCGTCAG
GCACGCTTGC TGATCGGCGC GGGCGGTATT CTGGCCGAAC TGATGTTGGC GGTTATTGCG
CTCTTGGCCT GGGCATTACT GCCAGATGGC GCGGCACGAA CGGCCGCCTT TATGCTTTCC
AGCGCGACGT GGCTGACCAC GTTGGTCGTA AACCTTAACC CTTTGATGCG CTTCGATGGC
TACTTTTTAC TGAGCGATTT CTGGCGCGTA GAAAACCTGC AAGAACGCGC CTATGCGCTC
TGCCGCTGGC GGTTGCGGGA AAGTCTGTTC GGCCATGGTC ACCCAGCACC GGAAAACCTC
TCCCCATCTC TGCAACGCAA ACTGCTGGTG TGGGGCTATG CCTCCTGGAT ATGGCGCTTT
TTCCTGTTCT TTGGCATTGC GCTGGTGGTT TACCACTTTT TTATCAAGGT GATCGGCATT
GGTTTAATGC TGGTTGAGAT CGTCTGGTTT ATCGCGCTAC CGATAGCCAA AGAAGCCTAT
GCCTGGTGGT CAATGCGCAA ATCAATACAT CCTATCGCTT TTTTGCGCAG CGCCCTGCTG
TGCTCAGCCC TCTTGTTTAT CTTGCTCTAT CCATGGGGTG GCAGTATCCA CATTCCTGCC
GTCTTGGAAG CCGAGAAAGT CAGTACCCTC TACAGTCCAG TACCGGCGCA GGTTAACCAG
CTACACGTTA CAGATGGTCA GCGGGTGGAT GCCGGAGACA TTCTGCTGGA ACTGACGTCA
GTCGACTTGG ATTATCGTCT CGATATTGAG CGTCAGCGTA TCACCCAGTT ACAACAGCAG
CGACAGCGTG GAGCGGCACG ACAGGAAACC GCGAGTGAAA TTCAGGTCAT GGATCGGCAG
TTAGCTGAGG CGCTGGCACG CTATCGAGGG TTGGCAGCAC AGCGTCAACG CTTAACAATC
CGAGCACCGC AGGCAGGTGT GGTTCGCGAT CTGGCGCGTG ATATGACAGC AGGACGCTGG
CTAACGGCGG ATACGCCATT ACTACGTGTG GTGGAACCCA CGCAGGGACG GGTGGTTGGC
TATATACCCG AAGAATCACT CATGCGTACT CAAGAGGGCA TGCAGGGCGT CTTCCTTGCC
GACGATCCCG CTTTCCCACG TCTTGACGTC ACGCTTCATG ACATCGCCCC CACAGGCAGC
GCTTACCTGC AACAAGAAAT GCTCGCATCC GATCGCCACG GCCCGATTGC CGTGCGACGC
GACCGCGACC ACAATCCTCA ACCAGTGCAG GCGCAGTACC GCGTTCATTT CATGGTACAG
GAAGAGCCAT TCCTGCCGCT GCAACAGCCT CTACGGGGCA GCGTCATTCT GGAAGGAGAA
AAGGAATCTA TTCTTGGCAC GGTGTGGCGT CGGGTAGCGG CATTGGGCAT CCGGGAAAGT
GGTTTTTAG
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| Protein sequence | MNPHLPPLRA DLQLVESAPG INGAPQWVLS DPITGRYFTL TPSAIRLLRH WPLRQPQQIL
AAANSEPGLP LRVKELEQLL QFLRQHDLIA ASDVEQRQRY LGKAQAMRTS LWKSVLHQYL
FFRIPLWRPD PVLNRCWPWL QHYGAPFLMW VFPCILLLGL FLVSRDWVRY THSFPHLFSL
SGMAVFGISL VFAKFIHELG HAFMAKRAGC RVQSMGVAFI VLFPLFYTDT TDAWKLKDRQ
ARLLIGAGGI LAELMLAVIA LLAWALLPDG AARTAAFMLS SATWLTTLVV NLNPLMRFDG
YFLLSDFWRV ENLQERAYAL CRWRLRESLF GHGHPAPENL SPSLQRKLLV WGYASWIWRF
FLFFGIALVV YHFFIKVIGI GLMLVEIVWF IALPIAKEAY AWWSMRKSIH PIAFLRSALL
CSALLFILLY PWGGSIHIPA VLEAEKVSTL YSPVPAQVNQ LHVTDGQRVD AGDILLELTS
VDLDYRLDIE RQRITQLQQQ RQRGAARQET ASEIQVMDRQ LAEALARYRG LAAQRQRLTI
RAPQAGVVRD LARDMTAGRW LTADTPLLRV VEPTQGRVVG YIPEESLMRT QEGMQGVFLA
DDPAFPRLDV TLHDIAPTGS AYLQQEMLAS DRHGPIAVRR DRDHNPQPVQ AQYRVHFMVQ
EEPFLPLQQP LRGSVILEGE KESILGTVWR RVAALGIRES GF
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