| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0428 |
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| Symbol | |
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| ID | 8131343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 490697 |
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| End bp | 492310 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863706 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003016020 |
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| Protein GI | 253686830 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.970035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA CACATCCGCA AGTTACGACT CTCGCTGCAG GGTTACTCTC GTTACTTTTC
GCACTCAATC CCGGTGCTTA TGCAGCACAA AGCAATGAAA AACCGGTGGC TGGCGGTATT
CTGAACGTTG GTCTGGGCAG CGATACGCCG ATTATCGACC CGCACATTAC GGCCTACGGC
GTAACGGCGC TGATTGCACG TAACGTGGTG GATTCACTGG TAGGACAGGC GGAAGACAAT
CGCTTTACGC CCTGGCTGGC GGAAAGTTGG AAAATAAACG ACGACAACAC CGAGTACACC
TTCCATCTGC GTAAGGACGT CACGTTCAGC GACGGCACCA AGCTAGATGC AGAGGCGGTG
AAATACAATA TCGAGCGTAT TCTCGATCCG AAAACCACCT CCAGCTACGC AAAATCGCTG
TTAGGCCCAA TCGACAAGAT CTCGACGCCG GATGACTATA CGATTGTGCT CCACTACAGC
TCACCGTTTG CGGCGCTGCT ACAGGGGCTG AGCCTGCCCT ATCTGGGCAT TCAATCCCCG
ACGTACCTGA AGAACACACC AAATACCAGT AACACCGTGG TAGGTTCCGG GCCGTTTATT
CTCGACTCCT TTGTGAAAGG CAGCGGCAGT AAGCTGACAA AACGCCCTGA TTACAACTGG
GGACCGGGTT ATGCCAAGCA TACTGGCCCA GCCTATCTGG ACGGTCTGGT GTTCAAATAT
CTGCCGGAAG CGTCGGTTCG CCTTGGCGCA CTGAGCAGCG GTCAGATTCA GGCAATTGAC
GCCGTACCGC CCGCCAATTT CCCAACGGTG AAGCGCAATC CGAAGCTGGA AGTGATCACC
TATGAGAACC CGGGCGTTAA CCGCGTGCTC TATCTCAACA CCACCAAAGG TCCTTTCCAG
GATGTCGCGG TGCGTAAGGC ATTCCAGAGC GCCGTAGATA CCAACGCTGC GGTGAAAGTC
GCTTTCTTCG GTACGCTGAA AGCCGCCGAT AACGTTCTCG GCCCGGCCAC GCTGTACTAC
GATCCGAGCG TTGCATCCCG CTGGGGCTTT GATGTGAAAA AAGCCAACGA ACTGCTGGAT
AACGCAGGCT GGAAACAGAA AGACAGCGAA GGCTTCCGCA CTAAAGATGG CAATCGTCTG
AGCGTCAAAT TCGTTTACGC CTCAACCAAC GTTGAAGCCG CGGATGTCGC ACTGTTCCAG
GCGGTGCAAT ATCAGGTGAA ACAGGCTGGC TTCGATGTTC AACTGACGCC GGTTGATGCG
GGTGAGTTCA CCACGCGCAC CAATGCCAAT GAGTACGATA TCGCCTCCAA CTTCTTCGTG
CGTGCAGAAC CGGATATTCT GCGTACCGTC TTTGATTCGG CCTATGCGCC ACCGAACGGC
AACAACTTTA CGCGCATCAG CGTGCTGAAT GACAAGCTGA GAAAGGCTAT CGGCGCGGGC
GAAGCAGAAC GTAAACAGCT CTACAGCGAA ATACAGCGAG AGGTCATCGA TCAGGCGTAT
GTGGTTCCAC TGTACATTCC CGCCTACCAA CTCGGCCTGT CCAAACAGGT ACAGGGCATA
AGCTGGGCTA CCAACGCAAA ACCGAACTTC TATGATGTCT GGATTAAACG TTAA
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| Protein sequence | MEKTHPQVTT LAAGLLSLLF ALNPGAYAAQ SNEKPVAGGI LNVGLGSDTP IIDPHITAYG
VTALIARNVV DSLVGQAEDN RFTPWLAESW KINDDNTEYT FHLRKDVTFS DGTKLDAEAV
KYNIERILDP KTTSSYAKSL LGPIDKISTP DDYTIVLHYS SPFAALLQGL SLPYLGIQSP
TYLKNTPNTS NTVVGSGPFI LDSFVKGSGS KLTKRPDYNW GPGYAKHTGP AYLDGLVFKY
LPEASVRLGA LSSGQIQAID AVPPANFPTV KRNPKLEVIT YENPGVNRVL YLNTTKGPFQ
DVAVRKAFQS AVDTNAAVKV AFFGTLKAAD NVLGPATLYY DPSVASRWGF DVKKANELLD
NAGWKQKDSE GFRTKDGNRL SVKFVYASTN VEAADVALFQ AVQYQVKQAG FDVQLTPVDA
GEFTTRTNAN EYDIASNFFV RAEPDILRTV FDSAYAPPNG NNFTRISVLN DKLRKAIGAG
EAERKQLYSE IQREVIDQAY VVPLYIPAYQ LGLSKQVQGI SWATNAKPNF YDVWIKR
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