| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0427 |
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| Symbol | |
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| ID | 8131342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 489760 |
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| End bp | 490719 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644863705 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003016019 |
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| Protein GI | 253686829 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.923467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCTG GATTAAACGT TAATCTGTAC GCGTTAGGTA AACGTCTCTT CACCATTCTG
GCTGTGCTCT GGGGCGCAGC CACATTGACG TTTATTGCCG TCAAACTGAT CCCCGGCGAT
CCGGTCGCCA TTCTTAGCGG CGGCGATAAC GTGGTGGATG AAGCCTATCG CGCCGTACTC
ATCAAACAAT TCGGGCTCGA CCAACCGCTG TGGGTGCAAT ATCTGCGCTA CTGCGGACAG
GCGCTACAGG GTGATTTTGG CGTCAGCTAT CTCTATCGCC TGCCGGTTGG TAGCGTGATT
AGCGATGCGA TGCATGAAAC TCTGCCGCTG GCGCTCGGCG GCCTGATTCT GGCGCTATTC
CTCGCGATTA CCAGCGCGCT GCTGACCGCA GGCCGTTATG GTGCGCTGCG TACCACCGTG
TCGTGGCTGG AACTGACGCT GCTTAGCACG CCGGTTTACT GGATTGGGAT CGTCCTGCTG
AGCCTGTTCA GCTTTCGCCT GCAATGGTTT CCGGTTACTG GCAACGACGG GGTGATGTCA
CTGGTGTTGC CGGTTATCAC GCTAAGCCTG CCGATTGCCG CGATTCTGAG TCAGGTACTG
CGTGACGGTC TGGAAGAGGC ACTCTCCCAG CCGTTTTCAT TAACCGTACG CACACGCGGC
GTCAGTGAAA TCCGGCTGCG CTTTCGCCAC GGTTTACGCC ACGCGGCGCT GGCAGCCTCA
ACGCTGACCG GTACGCTGCT GGCAAGCGTA CTCGGCGGCT CCGTGCTGAC TGAAACCGTC
TTTGGCCGCG CCGGGATCGG GCAGGTCACG CTGAGCGCCA TTGAAAACCG TGACATGCCG
CTAGTGCTGG GCGTCGTGAT GCTGTCCGCG TTCCTGTTCG TCGTCATCAA CCTGCTGGTG
GATGCGCTGT ATCTCATCAT CGATCCCCGC TTACGTAAGA AGGCGAGCGC CCATGAGTAG
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| Protein sequence | MMSGLNVNLY ALGKRLFTIL AVLWGAATLT FIAVKLIPGD PVAILSGGDN VVDEAYRAVL
IKQFGLDQPL WVQYLRYCGQ ALQGDFGVSY LYRLPVGSVI SDAMHETLPL ALGGLILALF
LAITSALLTA GRYGALRTTV SWLELTLLST PVYWIGIVLL SLFSFRLQWF PVTGNDGVMS
LVLPVITLSL PIAAILSQVL RDGLEEALSQ PFSLTVRTRG VSEIRLRFRH GLRHAALAAS
TLTGTLLASV LGGSVLTETV FGRAGIGQVT LSAIENRDMP LVLGVVMLSA FLFVVINLLV
DALYLIIDPR LRKKASAHE
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