| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0426 |
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| Symbol | |
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| ID | 8131341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 488901 |
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| End bp | 489767 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644863704 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003016018 |
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| Protein GI | 253686828 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.538661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGTG AACCGATGCC CTTTACGCAG ACACCATCCA GAAAAACCTA TCGCAGCCCG
TGGTTAAGCA CGGCGACGCT GTTGCCTGCC GCGATCGTTT TCCTGCTGGC GCTGGCGGTC
TTTTTCCCTT CACTGTTTAC CAGCCGCACT GCCGATGAAA TGGATATGGG AGCGGTATTC
CAGTCGCCGA ATAGCACCTA CTGGTTCGGC ACCGATCAAC TGGGGCGCGA TATTTTTTCC
CGTATCGTTC ACGGCACCTC GCTGTCGCTG GGTATCGGCG TCGGCGCGAT GCTGATCGCC
TGCTTCGGCG GCGTGCTGTT TGGCACCTTG TCAGTCCTCG CGCCGCTGCG CATCCGTCAG
GTTTTGGTAC GTCTGCTGGA CATCATGCTG GCGTTTCCCG ATCTACTGCT AGCGCTGCTG
GTGATCGCGG TACTGGGACG CGGTCCGGAA AACACCATGC TGGCCGTTGG GCTGGCGGGG
ATTGCCGGCT ATGCCCGTTT GATCCGCTCT CAGGTGCTGC AAGTCAGGCT ATCCGGCTAT
GTTGAACATG CGATTGCGCT GGGCGAACAC CCGCTGTATA TCGTTTTCCG CCATATCATT
CCCAATACGC TGCGCCCGTT GCTGATTGTC GCCACCATTG GCGTTGGTCA CGCGGTACTG
TCCGCCTCGG CGCTGAGCTT TTTGGGGCTG GGCGTCGTTC CACCGACCGC CGAGTGGGGA
GCGCTACTGG CTGACGGACG TAACTTCCTT GATATCGCCC CCTGGGTCAG CCTGCTGCCC
GCCAGCGTCG TCGCGCTGTC GGTGATTTCT ATTACATTGC TGGGACGTCG TTTACAGGCC
ATTTTGGCCA AAGGAGAGGC ACGATGA
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| Protein sequence | MSSEPMPFTQ TPSRKTYRSP WLSTATLLPA AIVFLLALAV FFPSLFTSRT ADEMDMGAVF
QSPNSTYWFG TDQLGRDIFS RIVHGTSLSL GIGVGAMLIA CFGGVLFGTL SVLAPLRIRQ
VLVRLLDIML AFPDLLLALL VIAVLGRGPE NTMLAVGLAG IAGYARLIRS QVLQVRLSGY
VEHAIALGEH PLYIVFRHII PNTLRPLLIV ATIGVGHAVL SASALSFLGL GVVPPTAEWG
ALLADGRNFL DIAPWVSLLP ASVVALSVIS ITLLGRRLQA ILAKGEAR
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