| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0422 |
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| Symbol | |
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| ID | 8131337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 485636 |
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| End bp | 486490 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863700 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003016014 |
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| Protein GI | 253686824 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.205512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACAG CAGTACGGGG TTTAAAATTA CAGACTGAAG ACTATTTCCT CACCGACAAG
AATGTCGTGA TGGTTGCCGA ACGCCACCCG CAGCCGGTGT TTCCGCTGCA TCATCATGAT
TTTGACGAAC TGGTGATTGT CTGGCGCGGG AATGGCCTGC ACCTCTGGAA CGATGTACCT
TACCGCATTA CCCGCGGCGA TATGTTTTAT GTTTCTGCTA ACGATCGTCA CAGCTATGAA
TCTGTCCACG GGCTAGAACT GGACAATATC CTCTATATTC GCAACCGCCT GACGCTATCC
GCCGACTGGC AGAGGTTGCT GCCGGGCGGG GAACATCCAC AAAGCCAGCG GCACTGGTGT
CTAGGCTCCG AAGGTATGGA TACCCTTCGT GAGAAGGTGG ATGCGCTGAG GCAGGAGTGT
ATGAAATCCG ATGCGCTGTC GCTGCAACTG AGTGAAGCGC TGCTGTTGCA GATTGCGCTG
CTGGCGGCGC GCTATCGTCA CACGCCGGAT AATCCACAGC TCGCCGATGC GCACCAGCTA
GATATGTTGA TGAATGCGCT GCGTGCCAGT ATTGCGGCAC CGTTCCGCTT TGAAGCCTTC
TGCGAACAGC ACCACTTCAG CGCGCGTAGT TTGCGTTCGC GCTTTAAAGA ACAAACGGGC
ATGAGCGTGC CGCACTACCT GCGCCAACTG CGGCTATGCA AGGCGATGGA ACTGCTGCGT
TATGATCTGC AAACCATCGG CGACATTGCT GCGCTGTGCG GGTTTGAAGA CAGCAACTAC
TTCTCTGTGG TGTTCCATCA GGCGTTCGGC GTCTCGCCCA GCGCCTACCG CCAGCGCTTC
CTGAATGTGG AGTGA
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| Protein sequence | MATAVRGLKL QTEDYFLTDK NVVMVAERHP QPVFPLHHHD FDELVIVWRG NGLHLWNDVP
YRITRGDMFY VSANDRHSYE SVHGLELDNI LYIRNRLTLS ADWQRLLPGG EHPQSQRHWC
LGSEGMDTLR EKVDALRQEC MKSDALSLQL SEALLLQIAL LAARYRHTPD NPQLADAHQL
DMLMNALRAS IAAPFRFEAF CEQHHFSARS LRSRFKEQTG MSVPHYLRQL RLCKAMELLR
YDLQTIGDIA ALCGFEDSNY FSVVFHQAFG VSPSAYRQRF LNVE
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