| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0399 |
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| Symbol | |
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| ID | 8131314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 456484 |
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| End bp | 457479 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863678 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003015992 |
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| Protein GI | 253686802 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAAC GCACAGTGTC CGCCAATAAA TCGATCGATA TGTACGCCGT CTATGTCTTT
GTGACGATGG CAGAAGCAGG AAGCATGACG GCAGCCGCCG CGCGGCTAGG CCTGACGCCC
TCTGCCATTT CGCAGACGAT CCGCTTATTG GAAGAAGATT TCGGCGTCAA ATTGGTTAAC
AGGGCTCGTC GCCCCTTTGT CCTGACGCCC TACGGCATTG CGTTGAAAAA CCGGGGAGAA
ATCCTGACGG AGGAGATCGC GAACCTCAAG GCGCAGGTGC TGGAGGCGGG AAAAGGGATT
AAACCCGACT TGCGTATCGG CCTGGTGGAT TCGTTTGCCA TCACCTGCGG TTCGGTGTTT
ACCAAGAGTT TGATGAAGAG TTCATCGCAG TTGCTGATTC GTACCGGGCT CAGCCCGCAG
CAGGGTGAAG CGTTAATGCG CCGCGAGCTG GATTTGATCG TCACCAGCGA CCCACTGATC
GACAGCGATA GCGTGGTTCG TCATCAGCTG TTTTCCGAAG GCTATTTCAT TATCACGCCG
CCGGATTACC GCAAACGCAT CAAAACGGTT GAGGACATCC GTGAGCTTTC CGCCGCACTG
CCGCTGGTGC GCTTTAACCG GAACTCGCAG ATTGGGATGC AGATTGAGCG TTATCTGCGC
CGCATCGATG TCCGCGTACC GAACATGCTC GAATTTGATA ACGCAGATAC CTTAACGTCG
ATGGTGGCGG CAGGTATCGG TTGGGCGGTA ACCACCCCGC TCAGTTTCCT GCAATCCGTT
GCACACTCTC GCGAGGTGCT AACGCATATG CCGGAACAGC TGAATATCAA ACGCTCGCTG
TATATTGTCG GGCACCGTGA TGAATACAGC GCGTTCTTTG AAGAAGCGTG CGATGTCACA
CATGACATTA TTAAAACCGT ATTTATTCCG AAATTGAAAA CGCTGAACCG CGGAATAGAA
AAGCTGGTTG AGATCAACCC GGATAATACG GAATAA
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| Protein sequence | MVKRTVSANK SIDMYAVYVF VTMAEAGSMT AAAARLGLTP SAISQTIRLL EEDFGVKLVN
RARRPFVLTP YGIALKNRGE ILTEEIANLK AQVLEAGKGI KPDLRIGLVD SFAITCGSVF
TKSLMKSSSQ LLIRTGLSPQ QGEALMRREL DLIVTSDPLI DSDSVVRHQL FSEGYFIITP
PDYRKRIKTV EDIRELSAAL PLVRFNRNSQ IGMQIERYLR RIDVRVPNML EFDNADTLTS
MVAAGIGWAV TTPLSFLQSV AHSREVLTHM PEQLNIKRSL YIVGHRDEYS AFFEEACDVT
HDIIKTVFIP KLKTLNRGIE KLVEINPDNT E
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