| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0390 |
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| Symbol | |
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| ID | 8131304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 445019 |
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| End bp | 446095 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863668 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_003015983 |
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| Protein GI | 253686793 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0209469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGGTG TATTAGACCG CTATATCGGC AAAACGATTT TCACCACCAT CATGACGACG
CTGTTCATGC TGGTGTCGCT CTCCGGCATC ATCAAGTTTG TCGACCAACT GCGTAAAGTC
GGGCAGGGCG AGTATTCGGC GCTGGGCGCT GGGCTGTACA CGCTGCTCAG CGTCCCCAAA
GATATTGAGA TCTTCTTCCC GATGGCGGCG CTGCTCGGCG CATTGCTCGG GCTGGGCCAG
CTCGCCACTC GCAGTGAACT GGTGGTGATG CAGGCTTCCG GCTTTACCCG CTTGCAGATT
GCGACTGCCG TGATGAAAAC TGCAATCCCG CTGGTGCTGT TGACGATGGC GATTGGCGAA
TGGGTTTCTC CGCAGGGGGA ACAGATGGCG CGTAACTACC GTTCTCAGAT GATCTCCGGT
GGGTCGATGA TCTCTACGCA GGGCGGGCTG TGGGCAAAAG ACGGCAATGA CTTTATCTAT
ATCGAACGGG TTGCGGGCGA TAAAGAGCTA TCTGGCGTTA ACATCTACCA CTTCGACGAT
AGCAACAAAC TGCTCTCTGT ACGCTATGCG GCCTCCGCTG AGTTTGAAGA TGACAGGAAT
GTCTGGAGGC TGTCGCAGGT TGATGAATCG GATTTGAGCG ATGGGAAACA GATTGGCGGT
AGCCAGACGC TTAGTGGTGA ATGGAAAACC AACCTGACGC CGGACAAACT GGGCGTGGTA
GCGCTGGAAC CTGACGCACT ATCAATCCGT GGGCTACATA ATTACGCCAA ATACCTGAAG
CAAAGCGGGC AGGAATCGAG CCGCTACCAG CTGAATATGT GGAGCAAAAT CTTTGCGCCG
GTCTCCGTGG CGGTGATGAT GCTCATGGCG GTCTCTTTCA TCTTCGGCCC GCTGCGCAGC
GTCTCTGCGG GGTCACGCAT CGTAATTGGT ATCAGTTTCG GCTTCCTCTT CTACCTGTTG
AATGAGATTT TCCGCCCGCT CAGCCTGGTC TATGGCATCC CGCCGATCCT GGGCGCCATC
TTACCGAGTT CGGTGTTCCT GTGCATCAGC GTGGCGCTGC TGCTGAAACG CCGATAG
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| Protein sequence | MFGVLDRYIG KTIFTTIMTT LFMLVSLSGI IKFVDQLRKV GQGEYSALGA GLYTLLSVPK
DIEIFFPMAA LLGALLGLGQ LATRSELVVM QASGFTRLQI ATAVMKTAIP LVLLTMAIGE
WVSPQGEQMA RNYRSQMISG GSMISTQGGL WAKDGNDFIY IERVAGDKEL SGVNIYHFDD
SNKLLSVRYA ASAEFEDDRN VWRLSQVDES DLSDGKQIGG SQTLSGEWKT NLTPDKLGVV
ALEPDALSIR GLHNYAKYLK QSGQESSRYQ LNMWSKIFAP VSVAVMMLMA VSFIFGPLRS
VSAGSRIVIG ISFGFLFYLL NEIFRPLSLV YGIPPILGAI LPSSVFLCIS VALLLKRR
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